Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC17.39■□□□□ 0.37
CDK7P50613 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CDK7P50613 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDK7P50613 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDK7P50613 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDK7P50613 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.39■□□□□ 0.37
CDK7P50613 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.39■□□□□ 0.37
CDK7P50613 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDK7P50613 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDK7P50613 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CDK7P50613 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC17.39■□□□□ 0.37
CDK7P50613 REXO1L1P-202ENST00000608646 1974 ntBASIC17.39■□□□□ 0.37
CDK7P50613 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.39■□□□□ 0.37
CDK7P50613 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CDK7P50613 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDK7P50613 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.38■□□□□ 0.37
CDK7P50613 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDK7P50613 AP001282.1-201ENST00000531301 1499 ntBASIC17.38■□□□□ 0.37
CDK7P50613 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
CDK7P50613 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDK7P50613 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CDK7P50613 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CDK7P50613 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.38■□□□□ 0.37
CDK7P50613 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.38■□□□□ 0.37
CDK7P50613 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDK7P50613 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDK7P50613 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDK7P50613 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC17.38■□□□□ 0.37
CDK7P50613 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDK7P50613 AL591846.1-201ENST00000451736 433 ntBASIC17.38■□□□□ 0.37
CDK7P50613 AC104306.2-201ENST00000451877 341 ntBASIC17.38■□□□□ 0.37
CDK7P50613 KRT18P43-201ENST00000469825 1281 ntBASIC17.38■□□□□ 0.37
CDK7P50613 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC17.38■□□□□ 0.37
CDK7P50613 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC17.38■□□□□ 0.37
CDK7P50613 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC17.38■□□□□ 0.37
CDK7P50613 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC17.38■□□□□ 0.37
CDK7P50613 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC17.38■□□□□ 0.37
CDK7P50613 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC17.38■□□□□ 0.37
CDK7P50613 PRKN-211ENST00000615065 261 ntTSL 5 BASIC17.38■□□□□ 0.37
CDK7P50613 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC17.38■□□□□ 0.37
CDK7P50613 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDK7P50613 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDK7P50613 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDK7P50613 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDK7P50613 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CDK7P50613 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.38■□□□□ 0.37
CDK7P50613 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CDK7P50613 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
CDK7P50613 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
CDK7P50613 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CDK7P50613 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDK7P50613 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.37■□□□□ 0.37
CDK7P50613 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDK7P50613 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDK7P50613 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDK7P50613 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CDK7P50613 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.37■□□□□ 0.37
CDK7P50613 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDK7P50613 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDK7P50613 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDK7P50613 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDK7P50613 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC17.37■□□□□ 0.37
CDK7P50613 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDK7P50613 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDK7P50613 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CDK7P50613 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC17.37■□□□□ 0.37
CDK7P50613 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CDK7P50613 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CDK7P50613 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
CDK7P50613 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDK7P50613 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC17.37■□□□□ 0.37
CDK7P50613 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDK7P50613 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC17.37■□□□□ 0.37
CDK7P50613 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CDK7P50613 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.37■□□□□ 0.37
CDK7P50613 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDK7P50613 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC17.37■□□□□ 0.37
CDK7P50613 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDK7P50613 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDK7P50613 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
CDK7P50613 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CDK7P50613 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.37■□□□□ 0.37
CDK7P50613 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CDK7P50613 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.37■□□□□ 0.37
CDK7P50613 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CDK7P50613 AC078925.2-201ENST00000624013 1973 ntBASIC17.37■□□□□ 0.37
CDK7P50613 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDK7P50613 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CDK7P50613 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CDK7P50613 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDK7P50613 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
CDK7P50613 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CDK7P50613 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDK7P50613 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDK7P50613 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDK7P50613 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDK7P50613 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CDK7P50613 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
CDK7P50613 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CDK7P50613 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms