Protein–RNA interactions for Protein: P49336

CDK8, Cyclin-dependent kinase 8, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK8P49336 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CDK8P49336 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC18.4■□□□□ 0.54
CDK8P49336 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDK8P49336 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC18.4■□□□□ 0.54
CDK8P49336 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CDK8P49336 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
CDK8P49336 HIST1H2BPS3-201ENST00000419683 341 ntBASIC18.4■□□□□ 0.54
CDK8P49336 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDK8P49336 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
CDK8P49336 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDK8P49336 ORC6-206ENST00000568364 888 ntTSL 5 BASIC18.4■□□□□ 0.54
CDK8P49336 AC233724.13-201ENST00000598383 410 ntBASIC18.4■□□□□ 0.54
CDK8P49336 AC017083.2-201ENST00000608069 979 ntBASIC18.4■□□□□ 0.54
CDK8P49336 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDK8P49336 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDK8P49336 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDK8P49336 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.4■□□□□ 0.54
CDK8P49336 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDK8P49336 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.4■□□□□ 0.54
CDK8P49336 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDK8P49336 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CDK8P49336 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.4■□□□□ 0.54
CDK8P49336 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
CDK8P49336 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.39■□□□□ 0.54
CDK8P49336 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
CDK8P49336 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC18.39■□□□□ 0.54
CDK8P49336 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CDK8P49336 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDK8P49336 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDK8P49336 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
CDK8P49336 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDK8P49336 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDK8P49336 MGST3-203ENST00000367885 680 ntTSL 2 BASIC18.39■□□□□ 0.53
CDK8P49336 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDK8P49336 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC18.39■□□□□ 0.53
CDK8P49336 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC18.39■□□□□ 0.53
CDK8P49336 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CDK8P49336 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC18.39■□□□□ 0.53
CDK8P49336 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDK8P49336 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC18.39■□□□□ 0.53
CDK8P49336 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDK8P49336 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC18.39■□□□□ 0.53
CDK8P49336 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC18.39■□□□□ 0.53
CDK8P49336 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC18.39■□□□□ 0.53
CDK8P49336 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC18.39■□□□□ 0.53
CDK8P49336 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC18.39■□□□□ 0.53
CDK8P49336 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC18.39■□□□□ 0.53
CDK8P49336 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDK8P49336 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC18.39■□□□□ 0.53
CDK8P49336 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDK8P49336 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDK8P49336 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC18.39■□□□□ 0.53
CDK8P49336 AC018665.1-201ENST00000622927 1362 ntBASIC18.39■□□□□ 0.53
CDK8P49336 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CDK8P49336 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC18.39■□□□□ 0.53
CDK8P49336 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDK8P49336 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC18.38■□□□□ 0.53
CDK8P49336 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDK8P49336 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CDK8P49336 PCDHA1-201ENST00000378133 2726 ntBASIC18.38■□□□□ 0.53
CDK8P49336 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CDK8P49336 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CDK8P49336 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDK8P49336 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDK8P49336 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC18.38■□□□□ 0.53
CDK8P49336 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDK8P49336 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDK8P49336 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDK8P49336 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDK8P49336 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC18.38■□□□□ 0.53
CDK8P49336 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDK8P49336 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDK8P49336 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
CDK8P49336 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDK8P49336 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
CDK8P49336 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDK8P49336 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDK8P49336 TEX30-203ENST00000376022 828 ntTSL 2 BASIC18.38■□□□□ 0.53
CDK8P49336 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC18.38■□□□□ 0.53
CDK8P49336 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC18.38■□□□□ 0.53
CDK8P49336 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC18.38■□□□□ 0.53
CDK8P49336 AC022210.1-201ENST00000449856 793 ntBASIC18.38■□□□□ 0.53
CDK8P49336 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC18.38■□□□□ 0.53
CDK8P49336 AC093813.1-201ENST00000605066 256 ntBASIC18.38■□□□□ 0.53
CDK8P49336 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC18.38■□□□□ 0.53
CDK8P49336 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC18.38■□□□□ 0.53
CDK8P49336 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CDK8P49336 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
CDK8P49336 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDK8P49336 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
CDK8P49336 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDK8P49336 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC18.38■□□□□ 0.53
CDK8P49336 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC18.38■□□□□ 0.53
CDK8P49336 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC18.38■□□□□ 0.53
CDK8P49336 AGER-206ENST00000375070 1463 ntTSL 5 BASIC18.38■□□□□ 0.53
CDK8P49336 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
CDK8P49336 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.38■□□□□ 0.53
CDK8P49336 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CDK8P49336 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CDK8P49336 MSTO2P-201ENST00000314835 1709 ntBASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms