Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MMP13P45452 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MMP13P45452 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC16.48■□□□□ 0.23
MMP13P45452 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
MMP13P45452 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
MMP13P45452 TSEN15P1-201ENST00000423257 515 ntBASIC16.48■□□□□ 0.23
MMP13P45452 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.48■□□□□ 0.23
MMP13P45452 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.48■□□□□ 0.23
MMP13P45452 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.48■□□□□ 0.23
MMP13P45452 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.48■□□□□ 0.23
MMP13P45452 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.48■□□□□ 0.23
MMP13P45452 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.48■□□□□ 0.23
MMP13P45452 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.48■□□□□ 0.23
MMP13P45452 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MMP13P45452 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.48■□□□□ 0.23
MMP13P45452 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.48■□□□□ 0.23
MMP13P45452 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
MMP13P45452 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
MMP13P45452 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
MMP13P45452 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MMP13P45452 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MMP13P45452 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MMP13P45452 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MMP13P45452 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MMP13P45452 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC16.48■□□□□ 0.23
MMP13P45452 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC16.48■□□□□ 0.23
MMP13P45452 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
MMP13P45452 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.48■□□□□ 0.23
MMP13P45452 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
MMP13P45452 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
MMP13P45452 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
MMP13P45452 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
MMP13P45452 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
MMP13P45452 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
MMP13P45452 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP13P45452 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP13P45452 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP13P45452 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.47■□□□□ 0.23
MMP13P45452 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP13P45452 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP13P45452 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.47■□□□□ 0.23
MMP13P45452 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP13P45452 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
MMP13P45452 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP13P45452 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP13P45452 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP13P45452 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
MMP13P45452 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.47■□□□□ 0.23
MMP13P45452 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MMP13P45452 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.47■□□□□ 0.23
MMP13P45452 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
MMP13P45452 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.47■□□□□ 0.23
MMP13P45452 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.47■□□□□ 0.23
MMP13P45452 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.47■□□□□ 0.23
MMP13P45452 GPALPP1-207ENST00000611650 899 ntBASIC16.47■□□□□ 0.23
MMP13P45452 AC018529.1-201ENST00000613063 361 ntBASIC16.47■□□□□ 0.23
MMP13P45452 AP001059.3-201ENST00000619053 235 ntBASIC16.47■□□□□ 0.23
MMP13P45452 LINC00628-201ENST00000628516 1289 ntBASIC16.47■□□□□ 0.23
MMP13P45452 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP13P45452 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MMP13P45452 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MMP13P45452 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP13P45452 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP13P45452 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP13P45452 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MMP13P45452 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MMP13P45452 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
MMP13P45452 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.47■□□□□ 0.23
MMP13P45452 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MMP13P45452 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
MMP13P45452 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
MMP13P45452 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MMP13P45452 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.46■□□□□ 0.23
MMP13P45452 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
MMP13P45452 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MMP13P45452 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MMP13P45452 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
MMP13P45452 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MMP13P45452 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MMP13P45452 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MMP13P45452 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MMP13P45452 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MMP13P45452 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
MMP13P45452 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MMP13P45452 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
MMP13P45452 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
MMP13P45452 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MMP13P45452 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MMP13P45452 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MMP13P45452 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.46■□□□□ 0.23
MMP13P45452 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
MMP13P45452 AL353705.2-201ENST00000428243 662 ntBASIC16.46■□□□□ 0.23
MMP13P45452 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.46■□□□□ 0.23
MMP13P45452 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.46■□□□□ 0.23
MMP13P45452 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.46■□□□□ 0.23
MMP13P45452 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
MMP13P45452 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MMP13P45452 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.46■□□□□ 0.23
MMP13P45452 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
MMP13P45452 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms