Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GRIA1P42261 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.03■□□□□ 0.16
GRIA1P42261 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.03■□□□□ 0.16
GRIA1P42261 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GRIA1P42261 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
GRIA1P42261 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GRIA1P42261 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
GRIA1P42261 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.03■□□□□ 0.16
GRIA1P42261 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GRIA1P42261 AC211486.1-202ENST00000416371 468 ntBASIC16.03■□□□□ 0.16
GRIA1P42261 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GRIA1P42261 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.03■□□□□ 0.16
GRIA1P42261 AC211476.1-201ENST00000503899 468 ntBASIC16.03■□□□□ 0.16
GRIA1P42261 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.03■□□□□ 0.16
GRIA1P42261 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GRIA1P42261 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GRIA1P42261 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GRIA1P42261 MIR4453-201ENST00000584019 89 ntBASIC16.03■□□□□ 0.16
GRIA1P42261 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.03■□□□□ 0.16
GRIA1P42261 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GRIA1P42261 RN7SL828P-201ENST00000607615 303 ntBASIC16.03■□□□□ 0.16
GRIA1P42261 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GRIA1P42261 AC009093.7-201ENST00000623853 1223 ntBASIC16.03■□□□□ 0.16
GRIA1P42261 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GRIA1P42261 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
GRIA1P42261 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GRIA1P42261 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.03■□□□□ 0.16
GRIA1P42261 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
GRIA1P42261 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GRIA1P42261 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.03■□□□□ 0.16
GRIA1P42261 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
GRIA1P42261 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.03■□□□□ 0.16
GRIA1P42261 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GRIA1P42261 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
GRIA1P42261 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
GRIA1P42261 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.03■□□□□ 0.16
GRIA1P42261 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
GRIA1P42261 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
GRIA1P42261 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
GRIA1P42261 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
GRIA1P42261 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.02■□□□□ 0.16
GRIA1P42261 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.02■□□□□ 0.16
GRIA1P42261 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
GRIA1P42261 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
GRIA1P42261 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
GRIA1P42261 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.02■□□□□ 0.16
GRIA1P42261 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
GRIA1P42261 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.02■□□□□ 0.16
GRIA1P42261 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
GRIA1P42261 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
GRIA1P42261 TCAF2P1-201ENST00000291129 2421 ntBASIC16.02■□□□□ 0.16
GRIA1P42261 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.02■□□□□ 0.16
GRIA1P42261 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
GRIA1P42261 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.02■□□□□ 0.16
GRIA1P42261 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.02■□□□□ 0.16
GRIA1P42261 AC136604.1-201ENST00000418535 575 ntBASIC16.02■□□□□ 0.16
GRIA1P42261 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.02■□□□□ 0.16
GRIA1P42261 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.02■□□□□ 0.16
GRIA1P42261 AC023141.5-201ENST00000458585 616 ntBASIC16.02■□□□□ 0.16
GRIA1P42261 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.02■□□□□ 0.16
GRIA1P42261 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
GRIA1P42261 AC092865.5-201ENST00000545435 363 ntBASIC16.02■□□□□ 0.16
GRIA1P42261 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.02■□□□□ 0.16
GRIA1P42261 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
GRIA1P42261 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC16.02■□□□□ 0.16
GRIA1P42261 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.02■□□□□ 0.16
GRIA1P42261 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.02■□□□□ 0.16
GRIA1P42261 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.02■□□□□ 0.16
GRIA1P42261 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
GRIA1P42261 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
GRIA1P42261 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
GRIA1P42261 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
GRIA1P42261 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
GRIA1P42261 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
GRIA1P42261 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
GRIA1P42261 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
GRIA1P42261 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
GRIA1P42261 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.02■□□□□ 0.15
GRIA1P42261 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC16.02■□□□□ 0.15
GRIA1P42261 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.02■□□□□ 0.15
GRIA1P42261 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.02■□□□□ 0.15
GRIA1P42261 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
GRIA1P42261 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.02■□□□□ 0.15
GRIA1P42261 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
GRIA1P42261 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.02■□□□□ 0.15
GRIA1P42261 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.02■□□□□ 0.15
GRIA1P42261 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
GRIA1P42261 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
GRIA1P42261 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.15
GRIA1P42261 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
GRIA1P42261 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
GRIA1P42261 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
GRIA1P42261 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GRIA1P42261 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
GRIA1P42261 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
GRIA1P42261 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.01■□□□□ 0.15
GRIA1P42261 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
GRIA1P42261 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
GRIA1P42261 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
GRIA1P42261 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms