Protein–RNA interactions for Protein: P36544

CHRNA7, Neuronal acetylcholine receptor subunit alpha-7, humanhuman

Predictions only

Length 502 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7P36544 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHRNA7P36544 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHRNA7P36544 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CHRNA7P36544 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.04□□□□□ -0.32
CHRNA7P36544 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC13.04□□□□□ -0.32
CHRNA7P36544 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC13.04□□□□□ -0.32
CHRNA7P36544 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.04□□□□□ -0.32
CHRNA7P36544 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.04□□□□□ -0.32
CHRNA7P36544 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CHRNA7P36544 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.04□□□□□ -0.32
CHRNA7P36544 C20orf181-201ENST00000623918 480 ntBASIC13.04□□□□□ -0.32
CHRNA7P36544 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHRNA7P36544 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHRNA7P36544 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHRNA7P36544 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC13.04□□□□□ -0.32
CHRNA7P36544 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CHRNA7P36544 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.04□□□□□ -0.32
CHRNA7P36544 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CHRNA7P36544 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.04□□□□□ -0.32
CHRNA7P36544 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CHRNA7P36544 ST20-AS1-201ENST00000560255 4223 ntBASIC13.04□□□□□ -0.32
CHRNA7P36544 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHRNA7P36544 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CHRNA7P36544 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHRNA7P36544 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC13.04□□□□□ -0.32
CHRNA7P36544 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHRNA7P36544 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
CHRNA7P36544 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHRNA7P36544 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CHRNA7P36544 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CHRNA7P36544 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CHRNA7P36544 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.03□□□□□ -0.32
CHRNA7P36544 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CHRNA7P36544 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CHRNA7P36544 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.03□□□□□ -0.32
CHRNA7P36544 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
CHRNA7P36544 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CHRNA7P36544 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CHRNA7P36544 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.03□□□□□ -0.32
CHRNA7P36544 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CHRNA7P36544 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.03□□□□□ -0.32
CHRNA7P36544 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CHRNA7P36544 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CHRNA7P36544 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC13.03□□□□□ -0.32
CHRNA7P36544 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CHRNA7P36544 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CHRNA7P36544 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
CHRNA7P36544 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.03□□□□□ -0.32
CHRNA7P36544 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CHRNA7P36544 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CHRNA7P36544 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.03□□□□□ -0.32
CHRNA7P36544 KRT18P13-201ENST00000400056 1290 ntBASIC13.03□□□□□ -0.32
CHRNA7P36544 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CHRNA7P36544 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.03□□□□□ -0.32
CHRNA7P36544 ALG1L5P-201ENST00000482043 771 ntBASIC13.03□□□□□ -0.32
CHRNA7P36544 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
CHRNA7P36544 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.03□□□□□ -0.32
CHRNA7P36544 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
CHRNA7P36544 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CHRNA7P36544 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC13.03□□□□□ -0.32
CHRNA7P36544 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.03□□□□□ -0.32
CHRNA7P36544 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13.03□□□□□ -0.32
CHRNA7P36544 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC13.03□□□□□ -0.32
CHRNA7P36544 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.03□□□□□ -0.32
CHRNA7P36544 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CHRNA7P36544 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC13.03□□□□□ -0.32
CHRNA7P36544 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CHRNA7P36544 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.03□□□□□ -0.32
CHRNA7P36544 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CHRNA7P36544 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.03□□□□□ -0.32
CHRNA7P36544 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CHRNA7P36544 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CHRNA7P36544 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CHRNA7P36544 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CHRNA7P36544 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.03□□□□□ -0.32
CHRNA7P36544 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CHRNA7P36544 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.03□□□□□ -0.32
CHRNA7P36544 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.03□□□□□ -0.32
CHRNA7P36544 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
CHRNA7P36544 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.02□□□□□ -0.32
CHRNA7P36544 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CHRNA7P36544 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CHRNA7P36544 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.02□□□□□ -0.32
CHRNA7P36544 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.02□□□□□ -0.32
CHRNA7P36544 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
CHRNA7P36544 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CHRNA7P36544 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CHRNA7P36544 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
CHRNA7P36544 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CHRNA7P36544 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.02□□□□□ -0.32
CHRNA7P36544 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.32
CHRNA7P36544 AC138035.3-201ENST00000622706 2791 ntBASIC13.02□□□□□ -0.32
CHRNA7P36544 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CHRNA7P36544 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC13.02□□□□□ -0.33
CHRNA7P36544 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.02□□□□□ -0.33
CHRNA7P36544 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC13.02□□□□□ -0.33
CHRNA7P36544 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13.02□□□□□ -0.33
CHRNA7P36544 HTR5BP-201ENST00000430851 1154 ntBASIC13.02□□□□□ -0.33
CHRNA7P36544 KRT18P34-201ENST00000488218 1270 ntBASIC13.02□□□□□ -0.33
CHRNA7P36544 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms