Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.34■□□□□ 0.21
PTPN7P35236 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.34■□□□□ 0.21
PTPN7P35236 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.34■□□□□ 0.21
PTPN7P35236 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PTPN7P35236 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN7P35236 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.34■□□□□ 0.21
PTPN7P35236 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN7P35236 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.34■□□□□ 0.21
PTPN7P35236 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN7P35236 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.34■□□□□ 0.21
PTPN7P35236 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.34■□□□□ 0.21
PTPN7P35236 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN7P35236 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN7P35236 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC16.34■□□□□ 0.21
PTPN7P35236 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN7P35236 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN7P35236 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PTPN7P35236 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.34■□□□□ 0.21
PTPN7P35236 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.33■□□□□ 0.21
PTPN7P35236 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.33■□□□□ 0.21
PTPN7P35236 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PTPN7P35236 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PTPN7P35236 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.33■□□□□ 0.21
PTPN7P35236 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
PTPN7P35236 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
PTPN7P35236 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PTPN7P35236 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN7P35236 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN7P35236 AL513477.1-201ENST00000602865 2407 ntBASIC16.33■□□□□ 0.2
PTPN7P35236 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN7P35236 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.33■□□□□ 0.2
PTPN7P35236 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
PTPN7P35236 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
PTPN7P35236 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.33■□□□□ 0.2
PTPN7P35236 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.33■□□□□ 0.2
PTPN7P35236 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN7P35236 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.33■□□□□ 0.2
PTPN7P35236 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.33■□□□□ 0.2
PTPN7P35236 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN7P35236 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN7P35236 AL035456.1-201ENST00000456064 1369 ntBASIC16.33■□□□□ 0.2
PTPN7P35236 KRT8P12-202ENST00000472924 1397 ntBASIC16.33■□□□□ 0.2
PTPN7P35236 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.33■□□□□ 0.2
PTPN7P35236 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
PTPN7P35236 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
PTPN7P35236 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN7P35236 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC16.33■□□□□ 0.2
PTPN7P35236 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN7P35236 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.33■□□□□ 0.2
PTPN7P35236 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN7P35236 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PTPN7P35236 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.33■□□□□ 0.2
PTPN7P35236 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN7P35236 LINC01101-201ENST00000622953 1884 ntBASIC16.33■□□□□ 0.2
PTPN7P35236 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN7P35236 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN7P35236 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN7P35236 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.33■□□□□ 0.2
PTPN7P35236 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.33■□□□□ 0.2
PTPN7P35236 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.33■□□□□ 0.2
PTPN7P35236 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PTPN7P35236 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.33■□□□□ 0.2
PTPN7P35236 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN7P35236 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN7P35236 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN7P35236 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PTPN7P35236 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN7P35236 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN7P35236 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
PTPN7P35236 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN7P35236 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN7P35236 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN7P35236 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN7P35236 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PTPN7P35236 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN7P35236 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN7P35236 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN7P35236 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN7P35236 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN7P35236 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN7P35236 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN7P35236 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN7P35236 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN7P35236 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
PTPN7P35236 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.32■□□□□ 0.2
PTPN7P35236 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.32■□□□□ 0.2
PTPN7P35236 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN7P35236 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.32■□□□□ 0.2
PTPN7P35236 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN7P35236 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.32■□□□□ 0.2
PTPN7P35236 AC091951.1-201ENST00000512854 2465 ntBASIC16.32■□□□□ 0.2
PTPN7P35236 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.32■□□□□ 0.2
PTPN7P35236 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.32■□□□□ 0.2
PTPN7P35236 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PTPN7P35236 AGAP7P-201ENST00000582299 2062 ntBASIC16.32■□□□□ 0.2
PTPN7P35236 MIR4469-201ENST00000583919 79 ntBASIC16.32■□□□□ 0.2
PTPN7P35236 FAM45BP-202ENST00000592932 1624 ntBASIC16.32■□□□□ 0.2
PTPN7P35236 AC009093.7-201ENST00000623853 1223 ntBASIC16.32■□□□□ 0.2
PTPN7P35236 AGAP14-201ENST00000624701 2060 ntBASIC16.32■□□□□ 0.2
PTPN7P35236 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms