Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A4P31645 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SLC6A4P31645 AC092127.1-201ENST00000567093 3455 ntBASIC16.15■□□□□ 0.18
SLC6A4P31645 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
SLC6A4P31645 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A4P31645 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A4P31645 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A4P31645 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A4P31645 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.15■□□□□ 0.18
SLC6A4P31645 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC6A4P31645 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A4P31645 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC6A4P31645 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.15■□□□□ 0.18
SLC6A4P31645 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC6A4P31645 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC6A4P31645 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
SLC6A4P31645 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A4P31645 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A4P31645 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SLC6A4P31645 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
SLC6A4P31645 RN7SL752P-201ENST00000463779 287 ntBASIC16.15■□□□□ 0.18
SLC6A4P31645 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC16.15■□□□□ 0.18
SLC6A4P31645 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.15■□□□□ 0.18
SLC6A4P31645 CR383656.12-201ENST00000549567 513 ntBASIC16.15■□□□□ 0.18
SLC6A4P31645 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.15■□□□□ 0.18
SLC6A4P31645 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A4P31645 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC16.15■□□□□ 0.18
SLC6A4P31645 AC132938.2-201ENST00000579188 680 ntBASIC16.15■□□□□ 0.18
SLC6A4P31645 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC16.15■□□□□ 0.18
SLC6A4P31645 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC6A4P31645 BRI3BPP1-201ENST00000594224 787 ntBASIC16.15■□□□□ 0.18
SLC6A4P31645 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SLC6A4P31645 AC000095.1-201ENST00000603208 874 ntBASIC16.15■□□□□ 0.18
SLC6A4P31645 AC239800.4-201ENST00000603712 296 ntBASIC16.15■□□□□ 0.18
SLC6A4P31645 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SLC6A4P31645 IGHV3-72-202ENST00000621503 303 ntBASIC16.15■□□□□ 0.18
SLC6A4P31645 AL591163.1-201ENST00000641757 987 ntBASIC16.15■□□□□ 0.18
SLC6A4P31645 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A4P31645 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A4P31645 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A4P31645 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A4P31645 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.15■□□□□ 0.18
SLC6A4P31645 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SLC6A4P31645 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.15■□□□□ 0.18
SLC6A4P31645 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SLC6A4P31645 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
SLC6A4P31645 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.14■□□□□ 0.18
SLC6A4P31645 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
SLC6A4P31645 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.14■□□□□ 0.18
SLC6A4P31645 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.14■□□□□ 0.17
SLC6A4P31645 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.14■□□□□ 0.17
SLC6A4P31645 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC6A4P31645 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
SLC6A4P31645 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.14■□□□□ 0.17
SLC6A4P31645 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SLC6A4P31645 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC6A4P31645 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC6A4P31645 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC6A4P31645 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC6A4P31645 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SLC6A4P31645 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC6A4P31645 AC008894.3-201ENST00000624324 3103 ntBASIC16.14■□□□□ 0.17
SLC6A4P31645 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC6A4P31645 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC6A4P31645 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC6A4P31645 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
SLC6A4P31645 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.14■□□□□ 0.17
SLC6A4P31645 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.14■□□□□ 0.17
SLC6A4P31645 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SLC6A4P31645 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.14■□□□□ 0.17
SLC6A4P31645 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.14■□□□□ 0.17
SLC6A4P31645 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.14■□□□□ 0.17
SLC6A4P31645 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC6A4P31645 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC16.14■□□□□ 0.17
SLC6A4P31645 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC16.14■□□□□ 0.17
SLC6A4P31645 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.14■□□□□ 0.17
SLC6A4P31645 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.14■□□□□ 0.17
SLC6A4P31645 AC015910.1-201ENST00000579400 975 ntBASIC16.14■□□□□ 0.17
SLC6A4P31645 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.14■□□□□ 0.17
SLC6A4P31645 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.14■□□□□ 0.17
SLC6A4P31645 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
SLC6A4P31645 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
SLC6A4P31645 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
SLC6A4P31645 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC6A4P31645 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.14■□□□□ 0.17
SLC6A4P31645 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.14■□□□□ 0.17
SLC6A4P31645 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC6A4P31645 AC063926.2-201ENST00000623766 1308 ntBASIC16.14■□□□□ 0.17
SLC6A4P31645 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.14■□□□□ 0.17
SLC6A4P31645 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC6A4P31645 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC6A4P31645 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SLC6A4P31645 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SLC6A4P31645 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC6A4P31645 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.13■□□□□ 0.17
SLC6A4P31645 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC6A4P31645 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.13■□□□□ 0.17
SLC6A4P31645 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
SLC6A4P31645 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.13■□□□□ 0.17
SLC6A4P31645 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms