Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.08□□□□□ -0.16
HOXC12P31275 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC14.08□□□□□ -0.16
HOXC12P31275 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.08□□□□□ -0.16
HOXC12P31275 AC017083.2-201ENST00000608069 979 ntBASIC14.08□□□□□ -0.16
HOXC12P31275 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
HOXC12P31275 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC14.08□□□□□ -0.16
HOXC12P31275 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.08□□□□□ -0.16
HOXC12P31275 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HOXC12P31275 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.08□□□□□ -0.16
HOXC12P31275 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.08□□□□□ -0.16
HOXC12P31275 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
HOXC12P31275 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.08□□□□□ -0.16
HOXC12P31275 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HOXC12P31275 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
HOXC12P31275 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HOXC12P31275 CYP4F24P-201ENST00000586049 1580 ntBASIC14.08□□□□□ -0.16
HOXC12P31275 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.08□□□□□ -0.16
HOXC12P31275 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HOXC12P31275 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HOXC12P31275 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HOXC12P31275 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
HOXC12P31275 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HOXC12P31275 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HOXC12P31275 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HOXC12P31275 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HOXC12P31275 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HOXC12P31275 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HOXC12P31275 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HOXC12P31275 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HOXC12P31275 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
HOXC12P31275 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HOXC12P31275 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HOXC12P31275 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HOXC12P31275 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.07□□□□□ -0.16
HOXC12P31275 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HOXC12P31275 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HOXC12P31275 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HOXC12P31275 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.07□□□□□ -0.16
HOXC12P31275 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HOXC12P31275 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
HOXC12P31275 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.07□□□□□ -0.16
HOXC12P31275 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.07□□□□□ -0.16
HOXC12P31275 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.07□□□□□ -0.16
HOXC12P31275 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HOXC12P31275 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.07□□□□□ -0.16
HOXC12P31275 API5-211ENST00000534695 560 ntTSL 5 BASIC14.07□□□□□ -0.16
HOXC12P31275 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HOXC12P31275 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HOXC12P31275 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
HOXC12P31275 TEX28P1-201ENST00000613479 1221 ntBASIC14.07□□□□□ -0.16
HOXC12P31275 TEX28P2-201ENST00000617764 1221 ntBASIC14.07□□□□□ -0.16
HOXC12P31275 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HOXC12P31275 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.07□□□□□ -0.16
HOXC12P31275 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC14.07□□□□□ -0.16
HOXC12P31275 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HOXC12P31275 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HOXC12P31275 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.07□□□□□ -0.16
HOXC12P31275 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
HOXC12P31275 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HOXC12P31275 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
HOXC12P31275 AL662844.4-201ENST00000606367 2838 ntBASIC14.07□□□□□ -0.16
HOXC12P31275 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
HOXC12P31275 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HOXC12P31275 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HOXC12P31275 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HOXC12P31275 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HOXC12P31275 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
HOXC12P31275 AC092364.2-201ENST00000596710 2692 ntBASIC14.07□□□□□ -0.16
HOXC12P31275 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HOXC12P31275 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HOXC12P31275 PID1-202ENST00000392054 2745 ntTSL 2 BASIC14.06□□□□□ -0.16
HOXC12P31275 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.06□□□□□ -0.16
HOXC12P31275 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.06□□□□□ -0.16
HOXC12P31275 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HOXC12P31275 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HOXC12P31275 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HOXC12P31275 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
HOXC12P31275 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.06□□□□□ -0.16
HOXC12P31275 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC14.06□□□□□ -0.16
HOXC12P31275 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HOXC12P31275 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HOXC12P31275 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
HOXC12P31275 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
HOXC12P31275 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.06□□□□□ -0.16
HOXC12P31275 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.06□□□□□ -0.16
HOXC12P31275 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HOXC12P31275 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.06□□□□□ -0.16
HOXC12P31275 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HOXC12P31275 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HOXC12P31275 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
HOXC12P31275 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
HOXC12P31275 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
HOXC12P31275 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HOXC12P31275 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
HOXC12P31275 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.06□□□□□ -0.16
HOXC12P31275 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.06□□□□□ -0.16
HOXC12P31275 RPS2P32-201ENST00000439199 892 ntBASIC14.06□□□□□ -0.16
HOXC12P31275 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.06□□□□□ -0.16
HOXC12P31275 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.06□□□□□ -0.16
HOXC12P31275 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms