Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC2P18074 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC2P18074 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC2P18074 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC2P18074 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC2P18074 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC2P18074 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.26■□□□□ 0.19
ERCC2P18074 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.26■□□□□ 0.19
ERCC2P18074 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.26■□□□□ 0.19
ERCC2P18074 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC2P18074 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC2P18074 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
ERCC2P18074 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC2P18074 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC2P18074 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC2P18074 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC2P18074 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC2P18074 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
ERCC2P18074 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC2P18074 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC2P18074 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC2P18074 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC2P18074 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.25■□□□□ 0.19
ERCC2P18074 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
ERCC2P18074 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC2P18074 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
ERCC2P18074 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC2P18074 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
ERCC2P18074 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
ERCC2P18074 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC2P18074 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC2P18074 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC2P18074 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC2P18074 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC2P18074 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.25■□□□□ 0.19
ERCC2P18074 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC2P18074 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
ERCC2P18074 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
ERCC2P18074 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC2P18074 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC2P18074 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
ERCC2P18074 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC2P18074 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC2P18074 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC2P18074 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.25■□□□□ 0.19
ERCC2P18074 SDHAP3-202ENST00000515467 728 ntBASIC16.25■□□□□ 0.19
ERCC2P18074 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.25■□□□□ 0.19
ERCC2P18074 AC044860.1-202ENST00000559481 777 ntBASIC16.25■□□□□ 0.19
ERCC2P18074 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.25■□□□□ 0.19
ERCC2P18074 AC005498.2-205ENST00000593218 784 ntBASIC16.25■□□□□ 0.19
ERCC2P18074 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.25■□□□□ 0.19
ERCC2P18074 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.25■□□□□ 0.19
ERCC2P18074 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC2P18074 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC2P18074 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC2P18074 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
ERCC2P18074 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC2P18074 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC2P18074 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC2P18074 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC2P18074 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC2P18074 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.25■□□□□ 0.19
ERCC2P18074 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.25■□□□□ 0.19
ERCC2P18074 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC2P18074 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
ERCC2P18074 AC087481.3-201ENST00000602886 1894 ntBASIC16.25■□□□□ 0.19
ERCC2P18074 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC2P18074 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC2P18074 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC2P18074 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC2P18074 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC2P18074 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC2P18074 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.24■□□□□ 0.19
ERCC2P18074 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC2P18074 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC2P18074 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC2P18074 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC2P18074 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.24■□□□□ 0.19
ERCC2P18074 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.24■□□□□ 0.19
ERCC2P18074 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.24■□□□□ 0.19
ERCC2P18074 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.24■□□□□ 0.19
ERCC2P18074 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC2P18074 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.24■□□□□ 0.19
ERCC2P18074 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.24■□□□□ 0.19
ERCC2P18074 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC2P18074 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.24■□□□□ 0.19
ERCC2P18074 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC2P18074 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.24■□□□□ 0.19
ERCC2P18074 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.24■□□□□ 0.19
ERCC2P18074 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
ERCC2P18074 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.24■□□□□ 0.19
ERCC2P18074 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.24■□□□□ 0.19
ERCC2P18074 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.24■□□□□ 0.19
ERCC2P18074 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.24■□□□□ 0.19
ERCC2P18074 CYMP-203ENST00000474680 1263 ntBASIC16.24■□□□□ 0.19
ERCC2P18074 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.24■□□□□ 0.19
ERCC2P18074 ZNF890P-202ENST00000530367 1156 ntBASIC16.24■□□□□ 0.19
ERCC2P18074 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.24■□□□□ 0.19
ERCC2P18074 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.24■□□□□ 0.19
ERCC2P18074 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 59.4 ms