Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC084121.4-201ENST00000641598 221 ntBASIC15.66■□□□□ 0.1
COL6A2P12110 AF228730.8-201ENST00000642140 221 ntBASIC15.66■□□□□ 0.1
COL6A2P12110 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL6A2P12110 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.66■□□□□ 0.1
COL6A2P12110 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL6A2P12110 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL6A2P12110 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
COL6A2P12110 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.66■□□□□ 0.1
COL6A2P12110 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.66■□□□□ 0.1
COL6A2P12110 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL6A2P12110 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
COL6A2P12110 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL6A2P12110 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL6A2P12110 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
COL6A2P12110 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
COL6A2P12110 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.66■□□□□ 0.1
COL6A2P12110 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL6A2P12110 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL6A2P12110 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.65■□□□□ 0.1
COL6A2P12110 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
COL6A2P12110 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL6A2P12110 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL6A2P12110 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL6A2P12110 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.65■□□□□ 0.1
COL6A2P12110 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.65■□□□□ 0.1
COL6A2P12110 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL6A2P12110 AGAP7P-201ENST00000582299 2062 ntBASIC15.65■□□□□ 0.1
COL6A2P12110 AGAP14-201ENST00000624701 2060 ntBASIC15.65■□□□□ 0.1
COL6A2P12110 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.65■□□□□ 0.1
COL6A2P12110 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL6A2P12110 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
COL6A2P12110 AC026396.1-201ENST00000419388 421 ntBASIC15.65■□□□□ 0.1
COL6A2P12110 FAM58CP-201ENST00000435741 640 ntBASIC15.65■□□□□ 0.1
COL6A2P12110 SPCS2P4-201ENST00000436160 681 ntBASIC15.65■□□□□ 0.1
COL6A2P12110 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.65■□□□□ 0.1
COL6A2P12110 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL6A2P12110 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.65■□□□□ 0.1
COL6A2P12110 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.65■□□□□ 0.1
COL6A2P12110 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.65■□□□□ 0.1
COL6A2P12110 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.65■□□□□ 0.1
COL6A2P12110 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC15.65■□□□□ 0.1
COL6A2P12110 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.65■□□□□ 0.1
COL6A2P12110 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.65■□□□□ 0.1
COL6A2P12110 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.65■□□□□ 0.1
COL6A2P12110 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
COL6A2P12110 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC15.65■□□□□ 0.1
COL6A2P12110 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.65■□□□□ 0.1
COL6A2P12110 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC15.65■□□□□ 0.1
COL6A2P12110 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.65■□□□□ 0.1
COL6A2P12110 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
COL6A2P12110 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.65■□□□□ 0.1
COL6A2P12110 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
COL6A2P12110 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
COL6A2P12110 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL6A2P12110 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL6A2P12110 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL6A2P12110 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
COL6A2P12110 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.64■□□□□ 0.1
COL6A2P12110 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.64■□□□□ 0.1
COL6A2P12110 AC148477.4-201ENST00000613430 1793 ntBASIC15.64■□□□□ 0.1
COL6A2P12110 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL6A2P12110 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
COL6A2P12110 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL6A2P12110 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL6A2P12110 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
COL6A2P12110 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
COL6A2P12110 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
COL6A2P12110 AC068587.6-202ENST00000641839 5619 ntBASIC15.64■□□□□ 0.09
COL6A2P12110 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.64■□□□□ 0.09
COL6A2P12110 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COL6A2P12110 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.64■□□□□ 0.09
COL6A2P12110 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL6A2P12110 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
COL6A2P12110 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
COL6A2P12110 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL6A2P12110 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL6A2P12110 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC15.64■□□□□ 0.09
COL6A2P12110 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
COL6A2P12110 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COL6A2P12110 AC136604.1-201ENST00000418535 575 ntBASIC15.64■□□□□ 0.09
COL6A2P12110 ACTG1P14-201ENST00000446382 1122 ntBASIC15.64■□□□□ 0.09
COL6A2P12110 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.64■□□□□ 0.09
COL6A2P12110 IGHV3-62-201ENST00000520057 340 ntBASIC15.64■□□□□ 0.09
COL6A2P12110 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC15.64■□□□□ 0.09
COL6A2P12110 HNRNPUP1-201ENST00000554987 333 ntBASIC15.64■□□□□ 0.09
COL6A2P12110 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.64■□□□□ 0.09
COL6A2P12110 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC15.64■□□□□ 0.09
COL6A2P12110 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
COL6A2P12110 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COL6A2P12110 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COL6A2P12110 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.64■□□□□ 0.09
COL6A2P12110 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL6A2P12110 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.09
COL6A2P12110 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
COL6A2P12110 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL6A2P12110 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
COL6A2P12110 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
COL6A2P12110 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COL6A2P12110 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
COL6A2P12110 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms