Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC26.97■■□□□ 1.91
TOP2AP11388 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
TOP2AP11388 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
TOP2AP11388 ILF3-AS1-201ENST00000591501 1983 ntBASIC26.97■■□□□ 1.91
TOP2AP11388 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC26.97■■□□□ 1.91
TOP2AP11388 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC26.97■■□□□ 1.91
TOP2AP11388 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
TOP2AP11388 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
TOP2AP11388 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
TOP2AP11388 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC26.97■■□□□ 1.91
TOP2AP11388 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC26.97■■□□□ 1.91
TOP2AP11388 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC26.96■■□□□ 1.91
TOP2AP11388 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC26.96■■□□□ 1.91
TOP2AP11388 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
TOP2AP11388 HLA-DQB2-229ENST00000411527 1059 ntBASIC26.96■■□□□ 1.91
TOP2AP11388 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC26.96■■□□□ 1.91
TOP2AP11388 SPCS2P2-201ENST00000603270 608 ntBASIC26.96■■□□□ 1.91
TOP2AP11388 AL358472.3-201ENST00000608147 415 ntBASIC26.96■■□□□ 1.91
TOP2AP11388 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
TOP2AP11388 SNX1-214ENST00000625244 324 ntTSL 5 BASIC26.96■■□□□ 1.91
TOP2AP11388 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
TOP2AP11388 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC26.96■■□□□ 1.91
TOP2AP11388 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC26.96■■□□□ 1.91
TOP2AP11388 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC26.96■■□□□ 1.91
TOP2AP11388 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC26.96■■□□□ 1.91
TOP2AP11388 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
TOP2AP11388 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
TOP2AP11388 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC26.95■■□□□ 1.91
TOP2AP11388 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
TOP2AP11388 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
TOP2AP11388 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC26.95■■□□□ 1.91
TOP2AP11388 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC26.95■■□□□ 1.91
TOP2AP11388 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC26.95■■□□□ 1.91
TOP2AP11388 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC26.95■■□□□ 1.91
TOP2AP11388 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC26.95■■□□□ 1.91
TOP2AP11388 AC079336.7-201ENST00000623428 1078 ntBASIC26.95■■□□□ 1.91
TOP2AP11388 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC26.95■■□□□ 1.91
TOP2AP11388 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
TOP2AP11388 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
TOP2AP11388 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
TOP2AP11388 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC26.95■■□□□ 1.9
TOP2AP11388 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
TOP2AP11388 AC127383.1-201ENST00000444697 1800 ntBASIC26.95■■□□□ 1.9
TOP2AP11388 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
TOP2AP11388 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC26.95■■□□□ 1.9
TOP2AP11388 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC26.95■■□□□ 1.9
TOP2AP11388 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC26.95■■□□□ 1.9
TOP2AP11388 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
TOP2AP11388 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC26.95■■□□□ 1.9
TOP2AP11388 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
TOP2AP11388 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
TOP2AP11388 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC26.95■■□□□ 1.9
TOP2AP11388 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
TOP2AP11388 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC26.95■■□□□ 1.9
TOP2AP11388 AL596276.2-201ENST00000447525 331 ntBASIC26.95■■□□□ 1.9
TOP2AP11388 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC26.95■■□□□ 1.9
TOP2AP11388 RN7SL774P-201ENST00000577467 290 ntBASIC26.95■■□□□ 1.9
TOP2AP11388 CDK7-214ENST00000626796 358 ntTSL 5 BASIC26.95■■□□□ 1.9
TOP2AP11388 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC26.95■■□□□ 1.9
TOP2AP11388 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC26.95■■□□□ 1.9
TOP2AP11388 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC26.95■■□□□ 1.9
TOP2AP11388 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC26.95■■□□□ 1.9
TOP2AP11388 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
TOP2AP11388 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC26.94■■□□□ 1.9
TOP2AP11388 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
TOP2AP11388 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC26.94■■□□□ 1.9
TOP2AP11388 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
TOP2AP11388 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC26.94■■□□□ 1.9
TOP2AP11388 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
TOP2AP11388 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
TOP2AP11388 KRT8P29-201ENST00000420409 1371 ntBASIC26.94■■□□□ 1.9
TOP2AP11388 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC26.94■■□□□ 1.9
TOP2AP11388 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC26.94■■□□□ 1.9
TOP2AP11388 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC26.94■■□□□ 1.9
TOP2AP11388 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
TOP2AP11388 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
TOP2AP11388 AC106794.1-201ENST00000506935 792 ntBASIC26.94■■□□□ 1.9
TOP2AP11388 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC26.94■■□□□ 1.9
TOP2AP11388 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC26.94■■□□□ 1.9
TOP2AP11388 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC26.94■■□□□ 1.9
TOP2AP11388 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
TOP2AP11388 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
TOP2AP11388 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
TOP2AP11388 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC26.93■■□□□ 1.9
TOP2AP11388 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
TOP2AP11388 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC26.93■■□□□ 1.9
TOP2AP11388 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC26.93■■□□□ 1.9
TOP2AP11388 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
TOP2AP11388 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
TOP2AP11388 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
TOP2AP11388 AC103988.2-201ENST00000561804 725 ntBASIC26.93■■□□□ 1.9
TOP2AP11388 MIR4683-201ENST00000579659 81 ntBASIC26.93■■□□□ 1.9
TOP2AP11388 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC26.93■■□□□ 1.9
TOP2AP11388 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
TOP2AP11388 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC26.93■■□□□ 1.9
TOP2AP11388 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC26.93■■□□□ 1.9
TOP2AP11388 CU633904.3-201ENST00000624042 1029 ntBASIC26.93■■□□□ 1.9
TOP2AP11388 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
TOP2AP11388 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
TOP2AP11388 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC26.92■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms