Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AC244093.1-201ENST00000610837 814 ntBASIC17.04■□□□□ 0.32
CHRNA1P02708 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNA1P02708 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNA1P02708 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNA1P02708 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CHRNA1P02708 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNA1P02708 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNA1P02708 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNA1P02708 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNA1P02708 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CHRNA1P02708 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CHRNA1P02708 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.04■□□□□ 0.32
CHRNA1P02708 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNA1P02708 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CHRNA1P02708 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNA1P02708 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.03■□□□□ 0.32
CHRNA1P02708 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNA1P02708 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.03■□□□□ 0.32
CHRNA1P02708 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.03■□□□□ 0.32
CHRNA1P02708 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNA1P02708 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNA1P02708 PFN1P12-201ENST00000455938 534 ntBASIC17.03■□□□□ 0.32
CHRNA1P02708 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC17.03■□□□□ 0.32
CHRNA1P02708 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNA1P02708 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.03■□□□□ 0.32
CHRNA1P02708 RIT1-205ENST00000539040 919 ntTSL 2 BASIC17.03■□□□□ 0.32
CHRNA1P02708 AC078819.1-201ENST00000547454 765 ntBASIC17.03■□□□□ 0.32
CHRNA1P02708 AC012085.1-201ENST00000548270 765 ntBASIC17.03■□□□□ 0.32
CHRNA1P02708 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC17.03■□□□□ 0.32
CHRNA1P02708 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC17.03■□□□□ 0.32
CHRNA1P02708 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNA1P02708 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC17.03■□□□□ 0.32
CHRNA1P02708 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNA1P02708 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC17.03■□□□□ 0.32
CHRNA1P02708 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNA1P02708 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC17.03■□□□□ 0.32
CHRNA1P02708 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNA1P02708 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CHRNA1P02708 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNA1P02708 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.03■□□□□ 0.32
CHRNA1P02708 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CHRNA1P02708 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNA1P02708 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNA1P02708 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNA1P02708 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CHRNA1P02708 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
CHRNA1P02708 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.32
CHRNA1P02708 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CHRNA1P02708 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC17.02■□□□□ 0.32
CHRNA1P02708 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHRNA1P02708 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHRNA1P02708 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CHRNA1P02708 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHRNA1P02708 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CHRNA1P02708 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHRNA1P02708 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CHRNA1P02708 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.02■□□□□ 0.32
CHRNA1P02708 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHRNA1P02708 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CHRNA1P02708 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.02■□□□□ 0.32
CHRNA1P02708 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC17.02■□□□□ 0.32
CHRNA1P02708 KRT18P25-201ENST00000508931 1278 ntBASIC17.02■□□□□ 0.32
CHRNA1P02708 ZNF767P-206ENST00000513792 565 ntBASIC17.02■□□□□ 0.32
CHRNA1P02708 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.02■□□□□ 0.32
CHRNA1P02708 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.02■□□□□ 0.32
CHRNA1P02708 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
CHRNA1P02708 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHRNA1P02708 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.02■□□□□ 0.31
CHRNA1P02708 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
CHRNA1P02708 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.02■□□□□ 0.31
CHRNA1P02708 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.02■□□□□ 0.31
CHRNA1P02708 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CHRNA1P02708 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.02■□□□□ 0.31
CHRNA1P02708 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CHRNA1P02708 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.01■□□□□ 0.31
CHRNA1P02708 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHRNA1P02708 PCDH8P1-201ENST00000428983 2773 ntBASIC17.01■□□□□ 0.31
CHRNA1P02708 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC17.01■□□□□ 0.31
CHRNA1P02708 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHRNA1P02708 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHRNA1P02708 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHRNA1P02708 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHRNA1P02708 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHRNA1P02708 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHRNA1P02708 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.01■□□□□ 0.31
CHRNA1P02708 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CHRNA1P02708 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.01■□□□□ 0.31
CHRNA1P02708 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.01■□□□□ 0.31
CHRNA1P02708 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHRNA1P02708 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHRNA1P02708 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHRNA1P02708 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC17.01■□□□□ 0.31
CHRNA1P02708 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.01■□□□□ 0.31
CHRNA1P02708 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC17.01■□□□□ 0.31
CHRNA1P02708 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.01■□□□□ 0.31
CHRNA1P02708 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC17.01■□□□□ 0.31
CHRNA1P02708 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CHRNA1P02708 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC17.01■□□□□ 0.31
CHRNA1P02708 AC023310.1-201ENST00000554836 735 ntBASIC17.01■□□□□ 0.31
CHRNA1P02708 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms