Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.07□□□□□ -0.16
APOC1P02654 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOC1P02654 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOC1P02654 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOC1P02654 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.07□□□□□ -0.16
APOC1P02654 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.07□□□□□ -0.16
APOC1P02654 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.07□□□□□ -0.16
APOC1P02654 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
APOC1P02654 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.07□□□□□ -0.16
APOC1P02654 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOC1P02654 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.07□□□□□ -0.16
APOC1P02654 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.07□□□□□ -0.16
APOC1P02654 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
APOC1P02654 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
APOC1P02654 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOC1P02654 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOC1P02654 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
APOC1P02654 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
APOC1P02654 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
APOC1P02654 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.07□□□□□ -0.16
APOC1P02654 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOC1P02654 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.07□□□□□ -0.16
APOC1P02654 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOC1P02654 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
APOC1P02654 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOC1P02654 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOC1P02654 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.07□□□□□ -0.16
APOC1P02654 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOC1P02654 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.07□□□□□ -0.16
APOC1P02654 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.07□□□□□ -0.16
APOC1P02654 KRT8P23-201ENST00000560090 1207 ntBASIC14.07□□□□□ -0.16
APOC1P02654 AL135744.1-201ENST00000565098 629 ntBASIC14.07□□□□□ -0.16
APOC1P02654 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
APOC1P02654 AC027307.2-201ENST00000591252 911 ntBASIC14.07□□□□□ -0.16
APOC1P02654 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.07□□□□□ -0.16
APOC1P02654 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC14.07□□□□□ -0.16
APOC1P02654 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC14.07□□□□□ -0.16
APOC1P02654 AC091812.2-201ENST00000619081 385 ntBASIC14.07□□□□□ -0.16
APOC1P02654 AC092865.6-201ENST00000642101 219 ntBASIC14.07□□□□□ -0.16
APOC1P02654 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOC1P02654 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.07□□□□□ -0.16
APOC1P02654 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.07□□□□□ -0.16
APOC1P02654 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
APOC1P02654 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOC1P02654 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
APOC1P02654 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
APOC1P02654 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOC1P02654 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
APOC1P02654 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.07□□□□□ -0.16
APOC1P02654 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOC1P02654 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.07□□□□□ -0.16
APOC1P02654 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOC1P02654 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.07□□□□□ -0.16
APOC1P02654 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC14.07□□□□□ -0.16
APOC1P02654 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
APOC1P02654 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOC1P02654 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
APOC1P02654 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOC1P02654 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOC1P02654 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.07□□□□□ -0.16
APOC1P02654 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOC1P02654 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOC1P02654 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
APOC1P02654 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.07□□□□□ -0.16
APOC1P02654 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.07□□□□□ -0.16
APOC1P02654 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
APOC1P02654 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.07□□□□□ -0.16
APOC1P02654 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.06□□□□□ -0.16
APOC1P02654 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC14.06□□□□□ -0.16
APOC1P02654 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOC1P02654 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOC1P02654 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOC1P02654 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOC1P02654 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
APOC1P02654 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.06□□□□□ -0.16
APOC1P02654 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
APOC1P02654 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
APOC1P02654 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
APOC1P02654 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.06□□□□□ -0.16
APOC1P02654 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
APOC1P02654 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
APOC1P02654 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOC1P02654 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
APOC1P02654 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOC1P02654 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOC1P02654 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOC1P02654 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.06□□□□□ -0.16
APOC1P02654 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOC1P02654 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
APOC1P02654 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOC1P02654 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOC1P02654 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOC1P02654 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
APOC1P02654 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.06□□□□□ -0.16
APOC1P02654 FAM58CP-201ENST00000435741 640 ntBASIC14.06□□□□□ -0.16
APOC1P02654 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
APOC1P02654 SPDYE11-202ENST00000450699 704 ntBASIC14.06□□□□□ -0.16
APOC1P02654 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.06□□□□□ -0.16
APOC1P02654 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.06□□□□□ -0.16
APOC1P02654 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms