Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GGPS1O95749 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.69■□□□□ 0.42
GGPS1O95749 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
GGPS1O95749 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
GGPS1O95749 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.69■□□□□ 0.42
GGPS1O95749 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.69■□□□□ 0.42
GGPS1O95749 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
GGPS1O95749 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
GGPS1O95749 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
GGPS1O95749 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
GGPS1O95749 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GGPS1O95749 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GGPS1O95749 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GGPS1O95749 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
GGPS1O95749 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.68■□□□□ 0.42
GGPS1O95749 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.68■□□□□ 0.42
GGPS1O95749 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GGPS1O95749 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
GGPS1O95749 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.68■□□□□ 0.42
GGPS1O95749 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GGPS1O95749 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
GGPS1O95749 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GGPS1O95749 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
GGPS1O95749 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GGPS1O95749 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC17.68■□□□□ 0.42
GGPS1O95749 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
GGPS1O95749 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
GGPS1O95749 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GGPS1O95749 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
GGPS1O95749 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GGPS1O95749 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
GGPS1O95749 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
GGPS1O95749 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.68■□□□□ 0.42
GGPS1O95749 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.68■□□□□ 0.42
GGPS1O95749 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.68■□□□□ 0.42
GGPS1O95749 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC17.68■□□□□ 0.42
GGPS1O95749 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
GGPS1O95749 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.68■□□□□ 0.42
GGPS1O95749 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC17.68■□□□□ 0.42
GGPS1O95749 KRT18P43-201ENST00000469825 1281 ntBASIC17.68■□□□□ 0.42
GGPS1O95749 RPL13AP25-201ENST00000484130 612 ntBASIC17.68■□□□□ 0.42
GGPS1O95749 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC17.68■□□□□ 0.42
GGPS1O95749 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC17.68■□□□□ 0.42
GGPS1O95749 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC17.68■□□□□ 0.42
GGPS1O95749 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC17.68■□□□□ 0.42
GGPS1O95749 CMC2-214ENST00000565925 640 ntTSL 5 BASIC17.68■□□□□ 0.42
GGPS1O95749 MIR5189-201ENST00000577370 114 ntBASIC17.68■□□□□ 0.42
GGPS1O95749 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC17.68■□□□□ 0.42
GGPS1O95749 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC17.68■□□□□ 0.42
GGPS1O95749 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GGPS1O95749 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GGPS1O95749 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GGPS1O95749 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GGPS1O95749 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC17.68■□□□□ 0.42
GGPS1O95749 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC17.68■□□□□ 0.42
GGPS1O95749 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
GGPS1O95749 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
GGPS1O95749 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
GGPS1O95749 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
GGPS1O95749 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GGPS1O95749 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GGPS1O95749 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GGPS1O95749 LINC02199-201ENST00000506655 2702 ntBASIC17.67■□□□□ 0.42
GGPS1O95749 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GGPS1O95749 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.67■□□□□ 0.42
GGPS1O95749 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.67■□□□□ 0.42
GGPS1O95749 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
GGPS1O95749 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.67■□□□□ 0.42
GGPS1O95749 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
GGPS1O95749 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
GGPS1O95749 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.67■□□□□ 0.42
GGPS1O95749 SOCS2P1-201ENST00000417727 557 ntBASIC17.67■□□□□ 0.42
GGPS1O95749 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC17.67■□□□□ 0.42
GGPS1O95749 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
GGPS1O95749 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC17.67■□□□□ 0.42
GGPS1O95749 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.67■□□□□ 0.42
GGPS1O95749 TDH-203ENST00000531764 1110 ntBASIC17.67■□□□□ 0.42
GGPS1O95749 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC17.67■□□□□ 0.42
GGPS1O95749 SNX29P1-201ENST00000548357 1007 ntBASIC17.67■□□□□ 0.42
GGPS1O95749 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.67■□□□□ 0.42
GGPS1O95749 AC120045.2-201ENST00000567334 178 ntBASIC17.67■□□□□ 0.42
GGPS1O95749 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC17.67■□□□□ 0.42
GGPS1O95749 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC17.67■□□□□ 0.42
GGPS1O95749 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC17.67■□□□□ 0.42
GGPS1O95749 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC17.67■□□□□ 0.42
GGPS1O95749 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.67■□□□□ 0.42
GGPS1O95749 AC000095.1-201ENST00000603208 874 ntBASIC17.67■□□□□ 0.42
GGPS1O95749 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.67■□□□□ 0.42
GGPS1O95749 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GGPS1O95749 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
GGPS1O95749 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GGPS1O95749 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
GGPS1O95749 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
GGPS1O95749 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
GGPS1O95749 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.67■□□□□ 0.42
GGPS1O95749 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
GGPS1O95749 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
GGPS1O95749 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
GGPS1O95749 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC17.67■□□□□ 0.42
GGPS1O95749 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms