Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH4O75427 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH4O75427 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC16.44■□□□□ 0.22
LRCH4O75427 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH4O75427 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH4O75427 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
LRCH4O75427 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC16.44■□□□□ 0.22
LRCH4O75427 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH4O75427 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRCH4O75427 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH4O75427 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH4O75427 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH4O75427 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
LRCH4O75427 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH4O75427 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.43■□□□□ 0.22
LRCH4O75427 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC16.43■□□□□ 0.22
LRCH4O75427 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH4O75427 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.43■□□□□ 0.22
LRCH4O75427 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
LRCH4O75427 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH4O75427 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH4O75427 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH4O75427 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.43■□□□□ 0.22
LRCH4O75427 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH4O75427 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH4O75427 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH4O75427 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.43■□□□□ 0.22
LRCH4O75427 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.43■□□□□ 0.22
LRCH4O75427 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.43■□□□□ 0.22
LRCH4O75427 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.43■□□□□ 0.22
LRCH4O75427 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
LRCH4O75427 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC16.43■□□□□ 0.22
LRCH4O75427 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.43■□□□□ 0.22
LRCH4O75427 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH4O75427 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH4O75427 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH4O75427 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH4O75427 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.43■□□□□ 0.22
LRCH4O75427 AC103702.1-201ENST00000548801 2630 ntBASIC16.43■□□□□ 0.22
LRCH4O75427 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRCH4O75427 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
LRCH4O75427 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.43■□□□□ 0.22
LRCH4O75427 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.43■□□□□ 0.22
LRCH4O75427 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
LRCH4O75427 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
LRCH4O75427 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH4O75427 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.42■□□□□ 0.22
LRCH4O75427 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.42■□□□□ 0.22
LRCH4O75427 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH4O75427 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
LRCH4O75427 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH4O75427 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH4O75427 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.42■□□□□ 0.22
LRCH4O75427 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH4O75427 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
LRCH4O75427 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH4O75427 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH4O75427 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH4O75427 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
LRCH4O75427 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH4O75427 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH4O75427 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH4O75427 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH4O75427 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH4O75427 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH4O75427 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH4O75427 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.42■□□□□ 0.22
LRCH4O75427 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.42■□□□□ 0.22
LRCH4O75427 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.42■□□□□ 0.22
LRCH4O75427 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC16.42■□□□□ 0.22
LRCH4O75427 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.42■□□□□ 0.22
LRCH4O75427 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH4O75427 AC010336.2-201ENST00000564226 506 ntBASIC16.42■□□□□ 0.22
LRCH4O75427 AC140878.1-201ENST00000565277 250 ntBASIC16.42■□□□□ 0.22
LRCH4O75427 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.42■□□□□ 0.22
LRCH4O75427 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.42■□□□□ 0.22
LRCH4O75427 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC16.42■□□□□ 0.22
LRCH4O75427 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC16.42■□□□□ 0.22
LRCH4O75427 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH4O75427 AC073592.8-201ENST00000624126 511 ntBASIC16.42■□□□□ 0.22
LRCH4O75427 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.42■□□□□ 0.22
LRCH4O75427 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH4O75427 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.42■□□□□ 0.22
LRCH4O75427 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH4O75427 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.42■□□□□ 0.22
LRCH4O75427 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH4O75427 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH4O75427 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.42■□□□□ 0.22
LRCH4O75427 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
LRCH4O75427 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH4O75427 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH4O75427 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH4O75427 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH4O75427 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.42■□□□□ 0.22
LRCH4O75427 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH4O75427 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
LRCH4O75427 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
LRCH4O75427 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRCH4O75427 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
LRCH4O75427 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms