Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC17.17■□□□□ 0.34
RNF40O75150 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF40O75150 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF40O75150 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF40O75150 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17.17■□□□□ 0.34
RNF40O75150 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF40O75150 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF40O75150 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF40O75150 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF40O75150 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.17■□□□□ 0.34
RNF40O75150 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.17■□□□□ 0.34
RNF40O75150 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF40O75150 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.17■□□□□ 0.34
RNF40O75150 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.17■□□□□ 0.34
RNF40O75150 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.17■□□□□ 0.34
RNF40O75150 SPDYE14P-201ENST00000442619 822 ntBASIC17.17■□□□□ 0.34
RNF40O75150 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.17■□□□□ 0.34
RNF40O75150 AC008677.1-201ENST00000519230 1561 ntBASIC17.17■□□□□ 0.34
RNF40O75150 IGHV3-42-201ENST00000520410 361 ntBASIC17.17■□□□□ 0.34
RNF40O75150 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.17■□□□□ 0.34
RNF40O75150 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.17■□□□□ 0.34
RNF40O75150 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF40O75150 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.17■□□□□ 0.34
RNF40O75150 KRT8P23-201ENST00000560090 1207 ntBASIC17.17■□□□□ 0.34
RNF40O75150 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF40O75150 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RNF40O75150 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF40O75150 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF40O75150 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
RNF40O75150 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF40O75150 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF40O75150 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF40O75150 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RNF40O75150 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RNF40O75150 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC17.17■□□□□ 0.34
RNF40O75150 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC17.17■□□□□ 0.34
RNF40O75150 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC17.17■□□□□ 0.34
RNF40O75150 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.16■□□□□ 0.34
RNF40O75150 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF40O75150 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF40O75150 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
RNF40O75150 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC17.16■□□□□ 0.34
RNF40O75150 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF40O75150 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF40O75150 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF40O75150 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF40O75150 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.16■□□□□ 0.34
RNF40O75150 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF40O75150 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF40O75150 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC17.16■□□□□ 0.34
RNF40O75150 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC17.16■□□□□ 0.34
RNF40O75150 TREML5P-201ENST00000421694 576 ntBASIC17.16■□□□□ 0.34
RNF40O75150 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.16■□□□□ 0.34
RNF40O75150 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.16■□□□□ 0.34
RNF40O75150 AC002472.2-201ENST00000442739 958 ntBASIC17.16■□□□□ 0.34
RNF40O75150 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
RNF40O75150 TSPY16P-201ENST00000449843 468 ntBASIC17.16■□□□□ 0.34
RNF40O75150 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF40O75150 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.16■□□□□ 0.34
RNF40O75150 TERF1P3-201ENST00000505638 1227 ntBASIC17.16■□□□□ 0.34
RNF40O75150 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.16■□□□□ 0.34
RNF40O75150 TNFRSF10A-AS1-201ENST00000518308 637 ntTSL 3 BASIC17.16■□□□□ 0.34
RNF40O75150 AC109635.5-201ENST00000533593 962 ntBASIC17.16■□□□□ 0.34
RNF40O75150 POLD4-211ENST00000539074 714 ntTSL 3 BASIC17.16■□□□□ 0.34
RNF40O75150 AC140878.1-201ENST00000565277 250 ntBASIC17.16■□□□□ 0.34
RNF40O75150 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
RNF40O75150 AL390754.1-201ENST00000619088 582 ntBASIC17.16■□□□□ 0.34
RNF40O75150 AF228730.6-201ENST00000641497 218 ntBASIC17.16■□□□□ 0.34
RNF40O75150 AC084121.3-201ENST00000641716 218 ntBASIC17.16■□□□□ 0.34
RNF40O75150 AC105233.6-201ENST00000642093 218 ntBASIC17.16■□□□□ 0.34
RNF40O75150 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF40O75150 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF40O75150 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC17.16■□□□□ 0.34
RNF40O75150 AC136621.1-201ENST00000624017 2304 ntBASIC17.16■□□□□ 0.34
RNF40O75150 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
RNF40O75150 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF40O75150 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF40O75150 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF40O75150 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
RNF40O75150 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RNF40O75150 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF40O75150 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RNF40O75150 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RNF40O75150 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RNF40O75150 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC17.15■□□□□ 0.34
RNF40O75150 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF40O75150 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF40O75150 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
RNF40O75150 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF40O75150 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
RNF40O75150 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.15■□□□□ 0.34
RNF40O75150 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.15■□□□□ 0.34
RNF40O75150 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF40O75150 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF40O75150 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
RNF40O75150 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF40O75150 SPDYE7P-202ENST00000420373 878 ntBASIC17.15■□□□□ 0.34
RNF40O75150 AC015922.1-201ENST00000421102 1152 ntBASIC17.15■□□□□ 0.34
RNF40O75150 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.15■□□□□ 0.34
RNF40O75150 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms