Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 AC036164.1-201ENST00000570544 333 ntBASIC15.97■□□□□ 0.15
KDELR3O43731 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.97■□□□□ 0.15
KDELR3O43731 SPDYE22P-201ENST00000582158 798 ntBASIC15.97■□□□□ 0.15
KDELR3O43731 AC000095.1-201ENST00000603208 874 ntBASIC15.97■□□□□ 0.15
KDELR3O43731 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC15.97■□□□□ 0.15
KDELR3O43731 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.97■□□□□ 0.15
KDELR3O43731 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
KDELR3O43731 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.97■□□□□ 0.15
KDELR3O43731 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
KDELR3O43731 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
KDELR3O43731 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC15.97■□□□□ 0.15
KDELR3O43731 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.97■□□□□ 0.15
KDELR3O43731 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
KDELR3O43731 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.97■□□□□ 0.15
KDELR3O43731 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.97■□□□□ 0.15
KDELR3O43731 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
KDELR3O43731 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
KDELR3O43731 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
KDELR3O43731 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
KDELR3O43731 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.97■□□□□ 0.15
KDELR3O43731 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
KDELR3O43731 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
KDELR3O43731 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
KDELR3O43731 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC15.96■□□□□ 0.15
KDELR3O43731 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
KDELR3O43731 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
KDELR3O43731 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
KDELR3O43731 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
KDELR3O43731 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
KDELR3O43731 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
KDELR3O43731 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
KDELR3O43731 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
KDELR3O43731 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
KDELR3O43731 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
KDELR3O43731 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
KDELR3O43731 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
KDELR3O43731 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.96■□□□□ 0.15
KDELR3O43731 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
KDELR3O43731 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC15.96■□□□□ 0.15
KDELR3O43731 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.96■□□□□ 0.15
KDELR3O43731 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
KDELR3O43731 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC15.96■□□□□ 0.15
KDELR3O43731 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
KDELR3O43731 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC15.96■□□□□ 0.15
KDELR3O43731 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC15.96■□□□□ 0.15
KDELR3O43731 COQ6-210ENST00000554920 649 ntTSL 3 BASIC15.96■□□□□ 0.15
KDELR3O43731 TP53TG3HP-202ENST00000569755 579 ntBASIC15.96■□□□□ 0.15
KDELR3O43731 LINC02084-201ENST00000606069 1096 ntBASIC15.96■□□□□ 0.15
KDELR3O43731 AC093726.1-201ENST00000608064 963 ntBASIC15.96■□□□□ 0.15
KDELR3O43731 AL662799.1-202ENST00000614205 422 ntBASIC15.96■□□□□ 0.15
KDELR3O43731 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
KDELR3O43731 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
KDELR3O43731 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
KDELR3O43731 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.96■□□□□ 0.15
KDELR3O43731 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
KDELR3O43731 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
KDELR3O43731 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
KDELR3O43731 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.14
KDELR3O43731 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.14
KDELR3O43731 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
KDELR3O43731 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC15.96■□□□□ 0.14
KDELR3O43731 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.96■□□□□ 0.14
KDELR3O43731 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.96■□□□□ 0.14
KDELR3O43731 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
KDELR3O43731 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
KDELR3O43731 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.14
KDELR3O43731 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
KDELR3O43731 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
KDELR3O43731 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.95■□□□□ 0.14
KDELR3O43731 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
KDELR3O43731 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
KDELR3O43731 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.95■□□□□ 0.14
KDELR3O43731 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
KDELR3O43731 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
KDELR3O43731 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
KDELR3O43731 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
KDELR3O43731 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
KDELR3O43731 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
KDELR3O43731 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
KDELR3O43731 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
KDELR3O43731 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
KDELR3O43731 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
KDELR3O43731 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.95■□□□□ 0.14
KDELR3O43731 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
KDELR3O43731 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
KDELR3O43731 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.95■□□□□ 0.14
KDELR3O43731 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.95■□□□□ 0.14
KDELR3O43731 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
KDELR3O43731 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
KDELR3O43731 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
KDELR3O43731 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
KDELR3O43731 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
KDELR3O43731 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC15.95■□□□□ 0.14
KDELR3O43731 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.95■□□□□ 0.14
KDELR3O43731 FAM86LP-201ENST00000478302 853 ntBASIC15.95■□□□□ 0.14
KDELR3O43731 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.95■□□□□ 0.14
KDELR3O43731 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.95■□□□□ 0.14
KDELR3O43731 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC15.95■□□□□ 0.14
KDELR3O43731 AC123567.1-201ENST00000548294 1261 ntBASIC15.95■□□□□ 0.14
KDELR3O43731 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms