Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
FOXS1O43638 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
FOXS1O43638 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.79□□□□□ -0.04
FOXS1O43638 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.79□□□□□ -0.04
FOXS1O43638 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
FOXS1O43638 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.79□□□□□ -0.04
FOXS1O43638 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
FOXS1O43638 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.79□□□□□ -0.04
FOXS1O43638 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
FOXS1O43638 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
FOXS1O43638 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.79□□□□□ -0.04
FOXS1O43638 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.79□□□□□ -0.04
FOXS1O43638 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC14.79□□□□□ -0.04
FOXS1O43638 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.79□□□□□ -0.04
FOXS1O43638 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.79□□□□□ -0.04
FOXS1O43638 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.79□□□□□ -0.04
FOXS1O43638 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.79□□□□□ -0.04
FOXS1O43638 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
FOXS1O43638 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
FOXS1O43638 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
FOXS1O43638 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
FOXS1O43638 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
FOXS1O43638 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.79□□□□□ -0.04
FOXS1O43638 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.79□□□□□ -0.04
FOXS1O43638 WFDC1-204ENST00000613603 549 ntBASIC14.79□□□□□ -0.04
FOXS1O43638 AC009090.5-201ENST00000624886 2285 ntBASIC14.79□□□□□ -0.04
FOXS1O43638 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.79□□□□□ -0.04
FOXS1O43638 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
FOXS1O43638 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
FOXS1O43638 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
FOXS1O43638 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FOXS1O43638 F11R-206ENST00000621309 4770 ntTSL 5 BASIC14.78□□□□□ -0.04
FOXS1O43638 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.78□□□□□ -0.04
FOXS1O43638 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FOXS1O43638 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.78□□□□□ -0.04
FOXS1O43638 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
FOXS1O43638 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
FOXS1O43638 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.78□□□□□ -0.04
FOXS1O43638 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
FOXS1O43638 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FOXS1O43638 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
FOXS1O43638 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
FOXS1O43638 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FOXS1O43638 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.78□□□□□ -0.04
FOXS1O43638 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
FOXS1O43638 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
FOXS1O43638 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
FOXS1O43638 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
FOXS1O43638 AC008741.2-201ENST00000612792 3115 ntBASIC14.78□□□□□ -0.04
FOXS1O43638 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
FOXS1O43638 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
FOXS1O43638 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
FOXS1O43638 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FOXS1O43638 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
FOXS1O43638 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FOXS1O43638 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FOXS1O43638 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
FOXS1O43638 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
FOXS1O43638 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.78□□□□□ -0.04
FOXS1O43638 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
FOXS1O43638 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.78□□□□□ -0.04
FOXS1O43638 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.78□□□□□ -0.04
FOXS1O43638 AP006294.1-201ENST00000415407 339 ntBASIC14.78□□□□□ -0.04
FOXS1O43638 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.78□□□□□ -0.04
FOXS1O43638 AL442647.2-201ENST00000429864 857 ntBASIC14.78□□□□□ -0.04
FOXS1O43638 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.78□□□□□ -0.04
FOXS1O43638 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.78□□□□□ -0.04
FOXS1O43638 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.78□□□□□ -0.04
FOXS1O43638 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC14.78□□□□□ -0.04
FOXS1O43638 RBM7-207ENST00000544582 692 ntTSL 3 BASIC14.78□□□□□ -0.04
FOXS1O43638 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.78□□□□□ -0.04
FOXS1O43638 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.78□□□□□ -0.04
FOXS1O43638 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.78□□□□□ -0.04
FOXS1O43638 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.78□□□□□ -0.04
FOXS1O43638 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14.78□□□□□ -0.04
FOXS1O43638 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
FOXS1O43638 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FOXS1O43638 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
FOXS1O43638 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
FOXS1O43638 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
FOXS1O43638 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC14.78□□□□□ -0.04
FOXS1O43638 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
FOXS1O43638 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FOXS1O43638 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
FOXS1O43638 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
FOXS1O43638 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.77□□□□□ -0.04
FOXS1O43638 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
FOXS1O43638 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
FOXS1O43638 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
FOXS1O43638 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
FOXS1O43638 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.77□□□□□ -0.04
FOXS1O43638 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
FOXS1O43638 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
FOXS1O43638 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
FOXS1O43638 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
FOXS1O43638 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.77□□□□□ -0.04
FOXS1O43638 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
FOXS1O43638 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
FOXS1O43638 MFF-204ENST00000353339 2186 ntTSL 5 BASIC14.77□□□□□ -0.04
FOXS1O43638 CU639417.3-201ENST00000624240 1404 ntBASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms