Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
SGCEO43556 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SGCEO43556 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SGCEO43556 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SGCEO43556 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SGCEO43556 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.09□□□□□ -0.15
SGCEO43556 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.09□□□□□ -0.15
SGCEO43556 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SGCEO43556 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SGCEO43556 AP3S2-216ENST00000617003 1561 ntBASIC14.09□□□□□ -0.15
SGCEO43556 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
SGCEO43556 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SGCEO43556 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SGCEO43556 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
SGCEO43556 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SGCEO43556 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
SGCEO43556 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
SGCEO43556 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
SGCEO43556 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SGCEO43556 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.08□□□□□ -0.16
SGCEO43556 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.08□□□□□ -0.16
SGCEO43556 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SGCEO43556 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.08□□□□□ -0.16
SGCEO43556 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.08□□□□□ -0.16
SGCEO43556 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.08□□□□□ -0.16
SGCEO43556 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
SGCEO43556 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SGCEO43556 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SGCEO43556 AL627223.1-201ENST00000416693 442 ntBASIC14.08□□□□□ -0.16
SGCEO43556 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.08□□□□□ -0.16
SGCEO43556 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.08□□□□□ -0.16
SGCEO43556 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.08□□□□□ -0.16
SGCEO43556 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.08□□□□□ -0.16
SGCEO43556 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.08□□□□□ -0.16
SGCEO43556 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.08□□□□□ -0.16
SGCEO43556 RARRES2P9-201ENST00000565168 469 ntBASIC14.08□□□□□ -0.16
SGCEO43556 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.08□□□□□ -0.16
SGCEO43556 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.08□□□□□ -0.16
SGCEO43556 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.08□□□□□ -0.16
SGCEO43556 AC026979.3-201ENST00000607315 403 ntBASIC14.08□□□□□ -0.16
SGCEO43556 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.08□□□□□ -0.16
SGCEO43556 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SGCEO43556 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SGCEO43556 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SGCEO43556 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.08□□□□□ -0.16
SGCEO43556 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SGCEO43556 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SGCEO43556 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SGCEO43556 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
SGCEO43556 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SGCEO43556 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.08□□□□□ -0.16
SGCEO43556 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SGCEO43556 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.08□□□□□ -0.16
SGCEO43556 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SGCEO43556 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.08□□□□□ -0.16
SGCEO43556 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SGCEO43556 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SGCEO43556 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SGCEO43556 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.08□□□□□ -0.16
SGCEO43556 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SGCEO43556 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SGCEO43556 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
SGCEO43556 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SGCEO43556 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
SGCEO43556 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.08□□□□□ -0.16
SGCEO43556 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SGCEO43556 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SGCEO43556 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SGCEO43556 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SGCEO43556 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SGCEO43556 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.07□□□□□ -0.16
SGCEO43556 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SGCEO43556 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SGCEO43556 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.07□□□□□ -0.16
SGCEO43556 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SGCEO43556 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SGCEO43556 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.07□□□□□ -0.16
SGCEO43556 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SGCEO43556 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SGCEO43556 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.07□□□□□ -0.16
SGCEO43556 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.07□□□□□ -0.16
SGCEO43556 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SGCEO43556 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SGCEO43556 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.07□□□□□ -0.16
SGCEO43556 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
SGCEO43556 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SGCEO43556 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SGCEO43556 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
SGCEO43556 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.07□□□□□ -0.16
SGCEO43556 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SGCEO43556 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.07□□□□□ -0.16
SGCEO43556 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SGCEO43556 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.07□□□□□ -0.16
SGCEO43556 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.07□□□□□ -0.16
SGCEO43556 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SGCEO43556 AL139010.1-201ENST00000454878 894 ntBASIC14.07□□□□□ -0.16
SGCEO43556 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SGCEO43556 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SGCEO43556 ALG1L8P-201ENST00000533887 760 ntBASIC14.07□□□□□ -0.16
SGCEO43556 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms