Protein–RNA interactions for Protein: O43525

KCNQ3, Potassium voltage-gated channel subfamily KQT member 3, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ3O43525 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KCNQ3O43525 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC20.07■□□□□ 0.8
KCNQ3O43525 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
KCNQ3O43525 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
KCNQ3O43525 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC20.07■□□□□ 0.8
KCNQ3O43525 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
KCNQ3O43525 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KCNQ3O43525 ACTBP11-201ENST00000436287 1126 ntBASIC20.07■□□□□ 0.8
KCNQ3O43525 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
KCNQ3O43525 FO681548.1-201ENST00000455617 1132 ntBASIC20.07■□□□□ 0.8
KCNQ3O43525 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC20.07■□□□□ 0.8
KCNQ3O43525 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
KCNQ3O43525 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
KCNQ3O43525 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC20.07■□□□□ 0.8
KCNQ3O43525 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
KCNQ3O43525 PFAS-212ENST00000625942 396 ntTSL 5 BASIC20.07■□□□□ 0.8
KCNQ3O43525 AC092127.1-201ENST00000567093 3455 ntBASIC20.07■□□□□ 0.8
KCNQ3O43525 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KCNQ3O43525 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KCNQ3O43525 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KCNQ3O43525 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC20.07■□□□□ 0.8
KCNQ3O43525 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC20.07■□□□□ 0.8
KCNQ3O43525 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KCNQ3O43525 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
KCNQ3O43525 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
KCNQ3O43525 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
KCNQ3O43525 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KCNQ3O43525 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
KCNQ3O43525 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC20.07■□□□□ 0.8
KCNQ3O43525 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KCNQ3O43525 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
KCNQ3O43525 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC20.07■□□□□ 0.8
KCNQ3O43525 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
KCNQ3O43525 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC20.06■□□□□ 0.8
KCNQ3O43525 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KCNQ3O43525 ACE-203ENST00000413513 2237 ntTSL 2 BASIC20.06■□□□□ 0.8
KCNQ3O43525 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
KCNQ3O43525 ZBTB12BP-201ENST00000314232 1122 ntBASIC20.06■□□□□ 0.8
KCNQ3O43525 RPF1-202ENST00000370656 724 ntTSL 2 BASIC20.06■□□□□ 0.8
KCNQ3O43525 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
KCNQ3O43525 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC20.06■□□□□ 0.8
KCNQ3O43525 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC20.06■□□□□ 0.8
KCNQ3O43525 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC20.06■□□□□ 0.8
KCNQ3O43525 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC20.06■□□□□ 0.8
KCNQ3O43525 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
KCNQ3O43525 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KCNQ3O43525 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
KCNQ3O43525 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KCNQ3O43525 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC20.06■□□□□ 0.8
KCNQ3O43525 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KCNQ3O43525 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
KCNQ3O43525 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC20.06■□□□□ 0.8
KCNQ3O43525 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
KCNQ3O43525 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KCNQ3O43525 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC20.05■□□□□ 0.8
KCNQ3O43525 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KCNQ3O43525 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KCNQ3O43525 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC20.05■□□□□ 0.8
KCNQ3O43525 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
KCNQ3O43525 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KCNQ3O43525 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
KCNQ3O43525 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
KCNQ3O43525 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC20.05■□□□□ 0.8
KCNQ3O43525 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
KCNQ3O43525 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
KCNQ3O43525 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KCNQ3O43525 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC20.05■□□□□ 0.8
KCNQ3O43525 SUN1-204ENST00000403868 978 ntTSL 2 BASIC20.05■□□□□ 0.8
KCNQ3O43525 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KCNQ3O43525 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KCNQ3O43525 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC20.05■□□□□ 0.8
KCNQ3O43525 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC20.05■□□□□ 0.8
KCNQ3O43525 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC20.05■□□□□ 0.8
KCNQ3O43525 RPL8-205ENST00000527914 551 ntTSL 3 BASIC20.05■□□□□ 0.8
KCNQ3O43525 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC20.05■□□□□ 0.8
KCNQ3O43525 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC20.05■□□□□ 0.8
KCNQ3O43525 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC20.05■□□□□ 0.8
KCNQ3O43525 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
KCNQ3O43525 GPR182-203ENST00000622922 591 ntBASIC20.05■□□□□ 0.8
KCNQ3O43525 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC20.05■□□□□ 0.8
KCNQ3O43525 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC20.05■□□□□ 0.8
KCNQ3O43525 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KCNQ3O43525 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KCNQ3O43525 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC20.05■□□□□ 0.8
KCNQ3O43525 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KCNQ3O43525 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC20.05■□□□□ 0.8
KCNQ3O43525 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KCNQ3O43525 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC20.05■□□□□ 0.8
KCNQ3O43525 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
KCNQ3O43525 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC20.05■□□□□ 0.8
KCNQ3O43525 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KCNQ3O43525 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
KCNQ3O43525 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KCNQ3O43525 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KCNQ3O43525 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC20.04■□□□□ 0.8
KCNQ3O43525 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KCNQ3O43525 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC20.04■□□□□ 0.8
KCNQ3O43525 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
KCNQ3O43525 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
KCNQ3O43525 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms