Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
PCDH17O14917 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH17O14917 AC022532.1-201ENST00000624563 1728 ntBASIC15.15■□□□□ 0.02
PCDH17O14917 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH17O14917 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PCDH17O14917 KRT8P12-202ENST00000472924 1397 ntBASIC15.15■□□□□ 0.02
PCDH17O14917 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH17O14917 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH17O14917 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH17O14917 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PCDH17O14917 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
PCDH17O14917 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH17O14917 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH17O14917 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH17O14917 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH17O14917 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH17O14917 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
PCDH17O14917 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.15■□□□□ 0.02
PCDH17O14917 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PCDH17O14917 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDH17O14917 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC15.15■□□□□ 0.02
PCDH17O14917 MIR661-201ENST00000384842 89 ntBASIC15.15■□□□□ 0.02
PCDH17O14917 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH17O14917 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH17O14917 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.15■□□□□ 0.02
PCDH17O14917 TSSK5P-201ENST00000423978 907 ntBASIC15.15■□□□□ 0.02
PCDH17O14917 AC005034.1-201ENST00000426657 489 ntBASIC15.15■□□□□ 0.02
PCDH17O14917 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.15■□□□□ 0.02
PCDH17O14917 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDH17O14917 UGT1A2P-201ENST00000454886 866 ntBASIC15.15■□□□□ 0.02
PCDH17O14917 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.15■□□□□ 0.02
PCDH17O14917 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.15■□□□□ 0.02
PCDH17O14917 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC15.15■□□□□ 0.02
PCDH17O14917 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.15■□□□□ 0.02
PCDH17O14917 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.15■□□□□ 0.02
PCDH17O14917 AL035252.4-201ENST00000624174 288 ntBASIC15.15■□□□□ 0.02
PCDH17O14917 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
PCDH17O14917 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH17O14917 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH17O14917 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
PCDH17O14917 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH17O14917 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDH17O14917 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.15■□□□□ 0.02
PCDH17O14917 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
PCDH17O14917 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.15■□□□□ 0.02
PCDH17O14917 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH17O14917 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH17O14917 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PCDH17O14917 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
PCDH17O14917 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH17O14917 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH17O14917 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH17O14917 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDH17O14917 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH17O14917 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH17O14917 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDH17O14917 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH17O14917 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDH17O14917 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.14■□□□□ 0.01
PCDH17O14917 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
PCDH17O14917 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH17O14917 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
PCDH17O14917 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH17O14917 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH17O14917 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH17O14917 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH17O14917 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
PCDH17O14917 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.14■□□□□ 0.01
PCDH17O14917 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH17O14917 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDH17O14917 AL080243.2-201ENST00000418783 582 ntBASIC15.14■□□□□ 0.01
PCDH17O14917 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH17O14917 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH17O14917 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.14■□□□□ 0.01
PCDH17O14917 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.14■□□□□ 0.01
PCDH17O14917 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.14■□□□□ 0.01
PCDH17O14917 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDH17O14917 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDH17O14917 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH17O14917 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH17O14917 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH17O14917 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC15.14■□□□□ 0.01
PCDH17O14917 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
PCDH17O14917 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDH17O14917 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
PCDH17O14917 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH17O14917 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDH17O14917 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH17O14917 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH17O14917 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDH17O14917 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH17O14917 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDH17O14917 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC15.14■□□□□ 0.01
PCDH17O14917 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH17O14917 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
PCDH17O14917 AC063926.2-201ENST00000623766 1308 ntBASIC15.14■□□□□ 0.01
PCDH17O14917 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
PCDH17O14917 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PCDH17O14917 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.14■□□□□ 0.01
PCDH17O14917 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms