Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RPH3AQ9Y2J0 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
RPH3AQ9Y2J0 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
RPH3AQ9Y2J0 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RPH3AQ9Y2J0 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RPH3AQ9Y2J0 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.61□□□□□ -0.07
RPH3AQ9Y2J0 BASP1P1-201ENST00000430708 665 ntBASIC14.61□□□□□ -0.07
RPH3AQ9Y2J0 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.61□□□□□ -0.07
RPH3AQ9Y2J0 AL512638.1-201ENST00000457493 794 ntBASIC14.61□□□□□ -0.07
RPH3AQ9Y2J0 MEIS3P1-201ENST00000495167 958 ntBASIC14.61□□□□□ -0.07
RPH3AQ9Y2J0 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.61□□□□□ -0.07
RPH3AQ9Y2J0 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RPH3AQ9Y2J0 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.61□□□□□ -0.07
RPH3AQ9Y2J0 RN7SL204P-201ENST00000582831 262 ntBASIC14.61□□□□□ -0.07
RPH3AQ9Y2J0 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.61□□□□□ -0.07
RPH3AQ9Y2J0 AL133215.2-201ENST00000609242 977 ntBASIC14.61□□□□□ -0.07
RPH3AQ9Y2J0 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RPH3AQ9Y2J0 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RPH3AQ9Y2J0 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
RPH3AQ9Y2J0 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
RPH3AQ9Y2J0 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RPH3AQ9Y2J0 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
RPH3AQ9Y2J0 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
RPH3AQ9Y2J0 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RPH3AQ9Y2J0 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
RPH3AQ9Y2J0 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
RPH3AQ9Y2J0 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
RPH3AQ9Y2J0 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
RPH3AQ9Y2J0 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.61□□□□□ -0.07
RPH3AQ9Y2J0 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RPH3AQ9Y2J0 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
RPH3AQ9Y2J0 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RPH3AQ9Y2J0 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RPH3AQ9Y2J0 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.6□□□□□ -0.07
RPH3AQ9Y2J0 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RPH3AQ9Y2J0 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RPH3AQ9Y2J0 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RPH3AQ9Y2J0 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RPH3AQ9Y2J0 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
RPH3AQ9Y2J0 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
RPH3AQ9Y2J0 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
RPH3AQ9Y2J0 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
RPH3AQ9Y2J0 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RPH3AQ9Y2J0 HAUS4P1-201ENST00000406739 1145 ntBASIC14.6□□□□□ -0.07
RPH3AQ9Y2J0 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.6□□□□□ -0.07
RPH3AQ9Y2J0 RPL37AP1-201ENST00000412502 279 ntBASIC14.6□□□□□ -0.07
RPH3AQ9Y2J0 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RPH3AQ9Y2J0 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
RPH3AQ9Y2J0 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RPH3AQ9Y2J0 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.6□□□□□ -0.07
RPH3AQ9Y2J0 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.6□□□□□ -0.07
RPH3AQ9Y2J0 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.6□□□□□ -0.07
RPH3AQ9Y2J0 AL079307.3-201ENST00000556114 283 ntBASIC14.6□□□□□ -0.07
RPH3AQ9Y2J0 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
RPH3AQ9Y2J0 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC14.6□□□□□ -0.07
RPH3AQ9Y2J0 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.6□□□□□ -0.07
RPH3AQ9Y2J0 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC14.6□□□□□ -0.07
RPH3AQ9Y2J0 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.6□□□□□ -0.07
RPH3AQ9Y2J0 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.6□□□□□ -0.07
RPH3AQ9Y2J0 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.6□□□□□ -0.07
RPH3AQ9Y2J0 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RPH3AQ9Y2J0 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
RPH3AQ9Y2J0 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
RPH3AQ9Y2J0 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
RPH3AQ9Y2J0 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
RPH3AQ9Y2J0 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
RPH3AQ9Y2J0 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RPH3AQ9Y2J0 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.6□□□□□ -0.07
RPH3AQ9Y2J0 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RPH3AQ9Y2J0 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
RPH3AQ9Y2J0 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RPH3AQ9Y2J0 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RPH3AQ9Y2J0 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
RPH3AQ9Y2J0 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.6□□□□□ -0.07
RPH3AQ9Y2J0 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
RPH3AQ9Y2J0 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RPH3AQ9Y2J0 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RPH3AQ9Y2J0 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
RPH3AQ9Y2J0 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RPH3AQ9Y2J0 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
RPH3AQ9Y2J0 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RPH3AQ9Y2J0 AC100757.3-201ENST00000622361 1406 ntBASIC14.59□□□□□ -0.07
RPH3AQ9Y2J0 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
RPH3AQ9Y2J0 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.59□□□□□ -0.07
RPH3AQ9Y2J0 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
RPH3AQ9Y2J0 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
RPH3AQ9Y2J0 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RPH3AQ9Y2J0 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
RPH3AQ9Y2J0 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.59□□□□□ -0.07
RPH3AQ9Y2J0 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RPH3AQ9Y2J0 MIR661-201ENST00000384842 89 ntBASIC14.59□□□□□ -0.07
RPH3AQ9Y2J0 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
RPH3AQ9Y2J0 AC241585.1-201ENST00000433527 519 ntBASIC14.59□□□□□ -0.07
RPH3AQ9Y2J0 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
RPH3AQ9Y2J0 AC245100.5-201ENST00000452108 331 ntBASIC14.59□□□□□ -0.07
RPH3AQ9Y2J0 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.59□□□□□ -0.07
RPH3AQ9Y2J0 HLA-V-204ENST00000476601 1289 ntBASIC14.59□□□□□ -0.07
RPH3AQ9Y2J0 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
RPH3AQ9Y2J0 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
RPH3AQ9Y2J0 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.59□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms