Protein–RNA interactions for Protein: Q9UNE2

RPH3AL, Rab effector Noc2, humanhuman

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3ALQ9UNE2 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 IER3-202ENST00000376377 1350 ntBASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 RCN1P1-201ENST00000400413 996 ntBASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 PTCHD3P3-201ENST00000403073 906 ntBASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 PCED1CP-201ENST00000419887 785 ntBASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 AC132008.2-207ENST00000454517 770 ntBASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 FAM86EP-206ENST00000510506 987 ntBASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 SDCCAG3P1-201ENST00000589292 1150 ntBASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 REXO1L3P-201ENST00000622202 1288 ntBASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC12.48□□□□□ -0.41
RPH3ALQ9UNE2 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RPH3ALQ9UNE2 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RPH3ALQ9UNE2 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC12.47□□□□□ -0.41
RPH3ALQ9UNE2 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC12.47□□□□□ -0.41
RPH3ALQ9UNE2 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
RPH3ALQ9UNE2 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
RPH3ALQ9UNE2 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC12.47□□□□□ -0.41
RPH3ALQ9UNE2 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC12.47□□□□□ -0.41
RPH3ALQ9UNE2 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RPH3ALQ9UNE2 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RPH3ALQ9UNE2 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RPH3ALQ9UNE2 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RPH3ALQ9UNE2 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RPH3ALQ9UNE2 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RPH3ALQ9UNE2 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RPH3ALQ9UNE2 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RPH3ALQ9UNE2 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RPH3ALQ9UNE2 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
RPH3ALQ9UNE2 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RPH3ALQ9UNE2 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RPH3ALQ9UNE2 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RPH3ALQ9UNE2 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RPH3ALQ9UNE2 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RPH3ALQ9UNE2 DPM2-202ENST00000373110 738 ntTSL 2 BASIC12.47□□□□□ -0.41
RPH3ALQ9UNE2 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RPH3ALQ9UNE2 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RPH3ALQ9UNE2 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC12.47□□□□□ -0.41
RPH3ALQ9UNE2 SLC25A6P2-201ENST00000497974 877 ntBASIC12.47□□□□□ -0.41
RPH3ALQ9UNE2 MSRA-206ENST00000521209 814 ntTSL 3 BASIC12.47□□□□□ -0.41
RPH3ALQ9UNE2 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC12.47□□□□□ -0.41
RPH3ALQ9UNE2 AC139887.3-201ENST00000568585 713 ntBASIC12.47□□□□□ -0.41
RPH3ALQ9UNE2 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC12.47□□□□□ -0.41
RPH3ALQ9UNE2 AL589182.2-201ENST00000619332 1049 ntBASIC12.47□□□□□ -0.41
RPH3ALQ9UNE2 AL139288.1-201ENST00000623748 933 ntBASIC12.47□□□□□ -0.41
RPH3ALQ9UNE2 ALCAM-201ENST00000306107 4701 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms