Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 AC092919.2-201ENST00000623631 1645 ntBASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC13.88□□□□□ -0.19
PCDHB16Q9NRJ7 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 AC007191.1-201ENST00000623179 2995 ntBASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 AL031284.1-201ENST00000419297 478 ntBASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 AC093724.1-201ENST00000448659 1027 ntBASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 HS6ST1P1-201ENST00000481504 1234 ntBASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 AC117500.6-201ENST00000624871 588 ntBASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 CR383656.2-201ENST00000548656 2254 ntBASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PCDHB16Q9NRJ7 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCDHB16Q9NRJ7 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCDHB16Q9NRJ7 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCDHB16Q9NRJ7 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC13.86□□□□□ -0.19
PCDHB16Q9NRJ7 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PCDHB16Q9NRJ7 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PCDHB16Q9NRJ7 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms