Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HPS4Q9NQG7 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
HPS4Q9NQG7 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
HPS4Q9NQG7 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HPS4Q9NQG7 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HPS4Q9NQG7 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HPS4Q9NQG7 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
HPS4Q9NQG7 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HPS4Q9NQG7 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
HPS4Q9NQG7 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
HPS4Q9NQG7 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.38■□□□□ 0.21
HPS4Q9NQG7 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC16.38■□□□□ 0.21
HPS4Q9NQG7 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC16.38■□□□□ 0.21
HPS4Q9NQG7 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
HPS4Q9NQG7 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HPS4Q9NQG7 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC16.38■□□□□ 0.21
HPS4Q9NQG7 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HPS4Q9NQG7 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HPS4Q9NQG7 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC16.38■□□□□ 0.21
HPS4Q9NQG7 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
HPS4Q9NQG7 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC16.38■□□□□ 0.21
HPS4Q9NQG7 AC036164.1-201ENST00000570544 333 ntBASIC16.38■□□□□ 0.21
HPS4Q9NQG7 AC015936.2-201ENST00000593177 259 ntBASIC16.38■□□□□ 0.21
HPS4Q9NQG7 MIR6775-201ENST00000617557 69 ntBASIC16.38■□□□□ 0.21
HPS4Q9NQG7 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HPS4Q9NQG7 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HPS4Q9NQG7 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
HPS4Q9NQG7 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
HPS4Q9NQG7 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.38■□□□□ 0.21
HPS4Q9NQG7 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.38■□□□□ 0.21
HPS4Q9NQG7 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HPS4Q9NQG7 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HPS4Q9NQG7 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HPS4Q9NQG7 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HPS4Q9NQG7 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
HPS4Q9NQG7 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HPS4Q9NQG7 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
HPS4Q9NQG7 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
HPS4Q9NQG7 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
HPS4Q9NQG7 REXO1L8P-201ENST00000604378 1897 ntBASIC16.37■□□□□ 0.21
HPS4Q9NQG7 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.37■□□□□ 0.21
HPS4Q9NQG7 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
HPS4Q9NQG7 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HPS4Q9NQG7 AC008741.2-201ENST00000612792 3115 ntBASIC16.37■□□□□ 0.21
HPS4Q9NQG7 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HPS4Q9NQG7 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.37■□□□□ 0.21
HPS4Q9NQG7 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
HPS4Q9NQG7 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
HPS4Q9NQG7 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HPS4Q9NQG7 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HPS4Q9NQG7 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.37■□□□□ 0.21
HPS4Q9NQG7 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
HPS4Q9NQG7 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.37■□□□□ 0.21
HPS4Q9NQG7 ANKRD19P-201ENST00000338192 862 ntBASIC16.37■□□□□ 0.21
HPS4Q9NQG7 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HPS4Q9NQG7 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
HPS4Q9NQG7 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
HPS4Q9NQG7 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HPS4Q9NQG7 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.37■□□□□ 0.21
HPS4Q9NQG7 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.37■□□□□ 0.21
HPS4Q9NQG7 AC234783.1-201ENST00000441761 496 ntBASIC16.37■□□□□ 0.21
HPS4Q9NQG7 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.37■□□□□ 0.21
HPS4Q9NQG7 USP32P1-208ENST00000506594 1164 ntBASIC16.37■□□□□ 0.21
HPS4Q9NQG7 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC16.37■□□□□ 0.21
HPS4Q9NQG7 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.37■□□□□ 0.21
HPS4Q9NQG7 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.37■□□□□ 0.21
HPS4Q9NQG7 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.37■□□□□ 0.21
HPS4Q9NQG7 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HPS4Q9NQG7 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HPS4Q9NQG7 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.37■□□□□ 0.21
HPS4Q9NQG7 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HPS4Q9NQG7 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
HPS4Q9NQG7 AL596257.1-201ENST00000641463 2694 ntBASIC16.37■□□□□ 0.21
HPS4Q9NQG7 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.37■□□□□ 0.21
HPS4Q9NQG7 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.37■□□□□ 0.21
HPS4Q9NQG7 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.37■□□□□ 0.21
HPS4Q9NQG7 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.37■□□□□ 0.21
HPS4Q9NQG7 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
HPS4Q9NQG7 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
HPS4Q9NQG7 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.37■□□□□ 0.21
HPS4Q9NQG7 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
HPS4Q9NQG7 AC005052.1-201ENST00000625181 2492 ntBASIC16.37■□□□□ 0.21
HPS4Q9NQG7 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
HPS4Q9NQG7 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
HPS4Q9NQG7 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HPS4Q9NQG7 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
HPS4Q9NQG7 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HPS4Q9NQG7 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HPS4Q9NQG7 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HPS4Q9NQG7 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HPS4Q9NQG7 LINC02199-201ENST00000506655 2702 ntBASIC16.36■□□□□ 0.21
HPS4Q9NQG7 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HPS4Q9NQG7 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HPS4Q9NQG7 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HPS4Q9NQG7 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.36■□□□□ 0.21
HPS4Q9NQG7 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HPS4Q9NQG7 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
HPS4Q9NQG7 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
HPS4Q9NQG7 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
HPS4Q9NQG7 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms