Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 TNN-202ENST00000621086 4234 ntTSL 5 BASIC18.88■□□□□ 0.61
RTN4Q9NQC3 NIN-202ENST00000324330 4364 ntTSL 5 BASIC18.88■□□□□ 0.61
RTN4Q9NQC3 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RTN4Q9NQC3 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC18.88■□□□□ 0.61
RTN4Q9NQC3 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTN4Q9NQC3 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RTN4Q9NQC3 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTN4Q9NQC3 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
RTN4Q9NQC3 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RTN4Q9NQC3 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTN4Q9NQC3 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RTN4Q9NQC3 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RTN4Q9NQC3 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RTN4Q9NQC3 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTN4Q9NQC3 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC18.88■□□□□ 0.61
RTN4Q9NQC3 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
RTN4Q9NQC3 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
RTN4Q9NQC3 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RTN4Q9NQC3 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC18.88■□□□□ 0.61
RTN4Q9NQC3 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RTN4Q9NQC3 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RTN4Q9NQC3 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RTN4Q9NQC3 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RTN4Q9NQC3 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RTN4Q9NQC3 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RTN4Q9NQC3 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
RTN4Q9NQC3 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
RTN4Q9NQC3 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RTN4Q9NQC3 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RTN4Q9NQC3 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RTN4Q9NQC3 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RTN4Q9NQC3 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC18.87■□□□□ 0.61
RTN4Q9NQC3 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RTN4Q9NQC3 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RTN4Q9NQC3 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
RTN4Q9NQC3 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.87■□□□□ 0.61
RTN4Q9NQC3 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
RTN4Q9NQC3 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RTN4Q9NQC3 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RTN4Q9NQC3 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC18.87■□□□□ 0.61
RTN4Q9NQC3 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
RTN4Q9NQC3 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.87■□□□□ 0.61
RTN4Q9NQC3 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.87■□□□□ 0.61
RTN4Q9NQC3 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
RTN4Q9NQC3 PPT1-213ENST00000641319 2388 ntBASIC18.87■□□□□ 0.61
RTN4Q9NQC3 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
RTN4Q9NQC3 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC18.87■□□□□ 0.61
RTN4Q9NQC3 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTN4Q9NQC3 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RTN4Q9NQC3 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RTN4Q9NQC3 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.86■□□□□ 0.61
RTN4Q9NQC3 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RTN4Q9NQC3 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC18.86■□□□□ 0.61
RTN4Q9NQC3 AC132938.5-201ENST00000624980 1813 ntBASIC18.86■□□□□ 0.61
RTN4Q9NQC3 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC18.86■□□□□ 0.61
RTN4Q9NQC3 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTN4Q9NQC3 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTN4Q9NQC3 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTN4Q9NQC3 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTN4Q9NQC3 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.86■□□□□ 0.61
RTN4Q9NQC3 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTN4Q9NQC3 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
RTN4Q9NQC3 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
RTN4Q9NQC3 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTN4Q9NQC3 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTN4Q9NQC3 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
RTN4Q9NQC3 PROCR-201ENST00000216968 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTN4Q9NQC3 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTN4Q9NQC3 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTN4Q9NQC3 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTN4Q9NQC3 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.86■□□□□ 0.61
RTN4Q9NQC3 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18.86■□□□□ 0.61
RTN4Q9NQC3 STK19B-204ENST00000512515 211 ntBASIC18.86■□□□□ 0.61
RTN4Q9NQC3 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RTN4Q9NQC3 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.86■□□□□ 0.61
RTN4Q9NQC3 AC011840.4-201ENST00000578471 627 ntBASIC18.86■□□□□ 0.61
RTN4Q9NQC3 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.86■□□□□ 0.61
RTN4Q9NQC3 AC090616.6-201ENST00000582640 721 ntBASIC18.86■□□□□ 0.61
RTN4Q9NQC3 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
RTN4Q9NQC3 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTN4Q9NQC3 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RTN4Q9NQC3 TCAF1P1-201ENST00000414990 2232 ntBASIC18.86■□□□□ 0.61
RTN4Q9NQC3 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
RTN4Q9NQC3 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTN4Q9NQC3 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC18.86■□□□□ 0.61
RTN4Q9NQC3 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
RTN4Q9NQC3 AC007614.4-201ENST00000564048 1827 ntBASIC18.86■□□□□ 0.61
RTN4Q9NQC3 AC112504.1-201ENST00000623415 1841 ntBASIC18.86■□□□□ 0.61
RTN4Q9NQC3 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.86■□□□□ 0.61
RTN4Q9NQC3 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTN4Q9NQC3 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
RTN4Q9NQC3 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RTN4Q9NQC3 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC18.85■□□□□ 0.61
RTN4Q9NQC3 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
RTN4Q9NQC3 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTN4Q9NQC3 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTN4Q9NQC3 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
RTN4Q9NQC3 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RTN4Q9NQC3 GPR89P-201ENST00000407924 1495 ntBASIC18.85■□□□□ 0.61
RTN4Q9NQC3 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms