Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 SDCCAG3P1-201ENST00000589292 1150 ntBASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 MTDHP3-201ENST00000594186 672 ntBASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 IGHV3OR16-7-201ENST00000604106 360 ntBASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 AC131212.3-201ENST00000624087 4219 ntBASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC10.68□□□□□ -0.7
SND1-IT1Q9HBX3 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 GPI-205ENST00000586425 1799 ntTSL 5 BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 POLL-206ENST00000370172 2308 ntTSL 2 BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 AC007191.1-201ENST00000623179 2995 ntBASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 AC090616.6-203ENST00000579186 1945 ntBASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 HAUS4P1-201ENST00000406739 1145 ntBASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 AL160237.2-201ENST00000556165 472 ntBASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 RNF151-202ENST00000569210 853 ntTSL 2 BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 MTDHP4-201ENST00000600287 670 ntBASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 AC091951.1-201ENST00000512854 2465 ntBASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 R3HDM2P2-201ENST00000401880 2116 ntBASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 GSN-215ENST00000545652 2428 ntTSL 2 BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 STK40-201ENST00000359297 4837 ntTSL 2 BASIC10.67□□□□□ -0.7
SND1-IT1Q9HBX3 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC10.67□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms