Protein–RNA interactions for Protein: Q9HB31

SEBOX, Homeobox protein SEBOX, humanhuman

Predicted RBP Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEBOXQ9HB31 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC13.52□□□□□ -0.25
SEBOXQ9HB31 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.52□□□□□ -0.25
SEBOXQ9HB31 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SEBOXQ9HB31 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SEBOXQ9HB31 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SEBOXQ9HB31 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SEBOXQ9HB31 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
SEBOXQ9HB31 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SEBOXQ9HB31 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
SEBOXQ9HB31 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
SEBOXQ9HB31 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SEBOXQ9HB31 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SEBOXQ9HB31 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.52□□□□□ -0.25
SEBOXQ9HB31 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
SEBOXQ9HB31 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
SEBOXQ9HB31 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SEBOXQ9HB31 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC13.52□□□□□ -0.25
SEBOXQ9HB31 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SEBOXQ9HB31 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SEBOXQ9HB31 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SEBOXQ9HB31 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
SEBOXQ9HB31 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SEBOXQ9HB31 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SEBOXQ9HB31 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
SEBOXQ9HB31 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
SEBOXQ9HB31 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
SEBOXQ9HB31 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
SEBOXQ9HB31 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SEBOXQ9HB31 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SEBOXQ9HB31 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SEBOXQ9HB31 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
SEBOXQ9HB31 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
SEBOXQ9HB31 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SEBOXQ9HB31 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SEBOXQ9HB31 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SEBOXQ9HB31 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SEBOXQ9HB31 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC13.51□□□□□ -0.25
SEBOXQ9HB31 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.51□□□□□ -0.25
SEBOXQ9HB31 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.51□□□□□ -0.25
SEBOXQ9HB31 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
SEBOXQ9HB31 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
SEBOXQ9HB31 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SEBOXQ9HB31 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SEBOXQ9HB31 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SEBOXQ9HB31 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.51□□□□□ -0.25
SEBOXQ9HB31 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC13.51□□□□□ -0.25
SEBOXQ9HB31 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SEBOXQ9HB31 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SEBOXQ9HB31 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SEBOXQ9HB31 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC13.51□□□□□ -0.25
SEBOXQ9HB31 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.51□□□□□ -0.25
SEBOXQ9HB31 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC13.51□□□□□ -0.25
SEBOXQ9HB31 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SEBOXQ9HB31 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.51□□□□□ -0.25
SEBOXQ9HB31 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC13.51□□□□□ -0.25
SEBOXQ9HB31 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.51□□□□□ -0.25
SEBOXQ9HB31 AP000344.2-201ENST00000512987 629 ntBASIC13.51□□□□□ -0.25
SEBOXQ9HB31 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC13.51□□□□□ -0.25
SEBOXQ9HB31 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.51□□□□□ -0.25
SEBOXQ9HB31 MIR3687-2-201ENST00000577708 61 ntBASIC13.51□□□□□ -0.25
SEBOXQ9HB31 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC13.51□□□□□ -0.25
SEBOXQ9HB31 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.51□□□□□ -0.25
SEBOXQ9HB31 AC022145.2-201ENST00000598203 171 ntBASIC13.51□□□□□ -0.25
SEBOXQ9HB31 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.51□□□□□ -0.25
SEBOXQ9HB31 MIR3687-1-201ENST00000614492 61 ntBASIC13.51□□□□□ -0.25
SEBOXQ9HB31 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.51□□□□□ -0.25
SEBOXQ9HB31 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SEBOXQ9HB31 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SEBOXQ9HB31 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SEBOXQ9HB31 AC073347.1-201ENST00000421633 2643 ntBASIC13.51□□□□□ -0.25
SEBOXQ9HB31 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
SEBOXQ9HB31 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SEBOXQ9HB31 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SEBOXQ9HB31 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
SEBOXQ9HB31 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SEBOXQ9HB31 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SEBOXQ9HB31 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SEBOXQ9HB31 AP005117.1-202ENST00000581724 1908 ntBASIC13.51□□□□□ -0.25
SEBOXQ9HB31 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.5□□□□□ -0.25
SEBOXQ9HB31 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.5□□□□□ -0.25
SEBOXQ9HB31 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SEBOXQ9HB31 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SEBOXQ9HB31 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SEBOXQ9HB31 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SEBOXQ9HB31 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SEBOXQ9HB31 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.5□□□□□ -0.25
SEBOXQ9HB31 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC13.5□□□□□ -0.25
SEBOXQ9HB31 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SEBOXQ9HB31 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SEBOXQ9HB31 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.5□□□□□ -0.25
SEBOXQ9HB31 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC13.5□□□□□ -0.25
SEBOXQ9HB31 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SEBOXQ9HB31 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.5□□□□□ -0.25
SEBOXQ9HB31 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.5□□□□□ -0.25
SEBOXQ9HB31 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SEBOXQ9HB31 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SEBOXQ9HB31 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.5□□□□□ -0.25
SEBOXQ9HB31 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SEBOXQ9HB31 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
SEBOXQ9HB31 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms