Protein–RNA interactions for Protein: Q9BV90

SNRNP25, U11/U12 small nuclear ribonucleoprotein 25 kDa protein, humanhuman

Known RBP Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25Q9BV90 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SNRNP25Q9BV90 LINC00554-201ENST00000564841 3011 ntBASIC16.4■□□□□ 0.22
SNRNP25Q9BV90 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.4■□□□□ 0.22
SNRNP25Q9BV90 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNRNP25Q9BV90 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.4■□□□□ 0.22
SNRNP25Q9BV90 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.4■□□□□ 0.22
SNRNP25Q9BV90 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNRNP25Q9BV90 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNRNP25Q9BV90 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.4■□□□□ 0.22
SNRNP25Q9BV90 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.4■□□□□ 0.22
SNRNP25Q9BV90 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.4■□□□□ 0.22
SNRNP25Q9BV90 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.4■□□□□ 0.22
SNRNP25Q9BV90 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNRNP25Q9BV90 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.4■□□□□ 0.22
SNRNP25Q9BV90 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNRNP25Q9BV90 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SNRNP25Q9BV90 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.4■□□□□ 0.22
SNRNP25Q9BV90 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNRNP25Q9BV90 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNRNP25Q9BV90 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNRNP25Q9BV90 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SNRNP25Q9BV90 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNRNP25Q9BV90 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
SNRNP25Q9BV90 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.4■□□□□ 0.22
SNRNP25Q9BV90 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNRNP25Q9BV90 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.4■□□□□ 0.22
SNRNP25Q9BV90 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.4■□□□□ 0.22
SNRNP25Q9BV90 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.4■□□□□ 0.22
SNRNP25Q9BV90 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.4■□□□□ 0.22
SNRNP25Q9BV90 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.4■□□□□ 0.22
SNRNP25Q9BV90 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.4■□□□□ 0.22
SNRNP25Q9BV90 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNRNP25Q9BV90 AC027369.6-201ENST00000525520 931 ntBASIC16.4■□□□□ 0.22
SNRNP25Q9BV90 AC010336.2-201ENST00000564226 506 ntBASIC16.4■□□□□ 0.22
SNRNP25Q9BV90 AL158211.3-201ENST00000607385 239 ntBASIC16.4■□□□□ 0.22
SNRNP25Q9BV90 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.4■□□□□ 0.22
SNRNP25Q9BV90 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SNRNP25Q9BV90 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNRNP25Q9BV90 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNRNP25Q9BV90 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNRNP25Q9BV90 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SNRNP25Q9BV90 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNRNP25Q9BV90 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNRNP25Q9BV90 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNRNP25Q9BV90 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNRNP25Q9BV90 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNRNP25Q9BV90 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SNRNP25Q9BV90 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.4■□□□□ 0.22
SNRNP25Q9BV90 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SNRNP25Q9BV90 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNRNP25Q9BV90 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SNRNP25Q9BV90 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC16.39■□□□□ 0.21
SNRNP25Q9BV90 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SNRNP25Q9BV90 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.39■□□□□ 0.21
SNRNP25Q9BV90 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
SNRNP25Q9BV90 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNRNP25Q9BV90 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNRNP25Q9BV90 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
SNRNP25Q9BV90 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SNRNP25Q9BV90 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SNRNP25Q9BV90 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
SNRNP25Q9BV90 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNRNP25Q9BV90 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SNRNP25Q9BV90 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SNRNP25Q9BV90 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.39■□□□□ 0.21
SNRNP25Q9BV90 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.39■□□□□ 0.21
SNRNP25Q9BV90 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC16.39■□□□□ 0.21
SNRNP25Q9BV90 AC097493.3-201ENST00000509725 367 ntBASIC16.39■□□□□ 0.21
SNRNP25Q9BV90 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNRNP25Q9BV90 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.39■□□□□ 0.21
SNRNP25Q9BV90 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.39■□□□□ 0.21
SNRNP25Q9BV90 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SNRNP25Q9BV90 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNRNP25Q9BV90 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.39■□□□□ 0.21
SNRNP25Q9BV90 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC16.39■□□□□ 0.21
SNRNP25Q9BV90 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.39■□□□□ 0.21
SNRNP25Q9BV90 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.39■□□□□ 0.21
SNRNP25Q9BV90 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.39■□□□□ 0.21
SNRNP25Q9BV90 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNRNP25Q9BV90 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.39■□□□□ 0.21
SNRNP25Q9BV90 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.39■□□□□ 0.21
SNRNP25Q9BV90 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
SNRNP25Q9BV90 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SNRNP25Q9BV90 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNRNP25Q9BV90 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNRNP25Q9BV90 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNRNP25Q9BV90 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
SNRNP25Q9BV90 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNRNP25Q9BV90 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
SNRNP25Q9BV90 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.39■□□□□ 0.21
SNRNP25Q9BV90 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNRNP25Q9BV90 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNRNP25Q9BV90 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNRNP25Q9BV90 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.39■□□□□ 0.21
SNRNP25Q9BV90 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNRNP25Q9BV90 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
SNRNP25Q9BV90 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SNRNP25Q9BV90 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
SNRNP25Q9BV90 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SNRNP25Q9BV90 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms