Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CMSS1Q9BQ75 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CMSS1Q9BQ75 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CMSS1Q9BQ75 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.62□□□□□ -0.23
CMSS1Q9BQ75 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CMSS1Q9BQ75 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CMSS1Q9BQ75 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CMSS1Q9BQ75 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC13.62□□□□□ -0.23
CMSS1Q9BQ75 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CMSS1Q9BQ75 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.62□□□□□ -0.23
CMSS1Q9BQ75 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CMSS1Q9BQ75 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CMSS1Q9BQ75 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CMSS1Q9BQ75 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CMSS1Q9BQ75 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CMSS1Q9BQ75 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.62□□□□□ -0.23
CMSS1Q9BQ75 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.62□□□□□ -0.23
CMSS1Q9BQ75 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CMSS1Q9BQ75 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 AC006486.2-201ENST00000624246 2199 ntBASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 MED22-202ENST00000371999 987 ntTSL 3 BASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 POLD4-207ENST00000531239 584 ntTSL 2 BASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 AC109635.5-201ENST00000533593 962 ntBASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 CD63-210ENST00000550776 870 ntTSL 5 BASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 AL121912.1-201ENST00000603683 238 ntBASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 AL009183.1-201ENST00000603760 355 ntBASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 AL109954.1-202ENST00000564051 2148 ntBASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 AP001282.1-201ENST00000531301 1499 ntBASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
CMSS1Q9BQ75 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.6□□□□□ -0.23
CMSS1Q9BQ75 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
CMSS1Q9BQ75 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.6□□□□□ -0.23
CMSS1Q9BQ75 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CMSS1Q9BQ75 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CMSS1Q9BQ75 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CMSS1Q9BQ75 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CMSS1Q9BQ75 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CMSS1Q9BQ75 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CMSS1Q9BQ75 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CMSS1Q9BQ75 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CMSS1Q9BQ75 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CMSS1Q9BQ75 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CMSS1Q9BQ75 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CMSS1Q9BQ75 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CMSS1Q9BQ75 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CMSS1Q9BQ75 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CMSS1Q9BQ75 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.6□□□□□ -0.23
CMSS1Q9BQ75 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.6□□□□□ -0.23
CMSS1Q9BQ75 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC13.6□□□□□ -0.23
CMSS1Q9BQ75 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CMSS1Q9BQ75 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CMSS1Q9BQ75 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC13.6□□□□□ -0.23
CMSS1Q9BQ75 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms