Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.79□□□□□ -0.04
TM9SF2Q99805 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF2Q99805 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
TM9SF2Q99805 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
TM9SF2Q99805 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.78□□□□□ -0.04
TM9SF2Q99805 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC14.78□□□□□ -0.04
TM9SF2Q99805 CDC14C-201ENST00000428251 1719 ntBASIC14.78□□□□□ -0.04
TM9SF2Q99805 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
TM9SF2Q99805 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF2Q99805 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF2Q99805 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.78□□□□□ -0.04
TM9SF2Q99805 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
TM9SF2Q99805 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF2Q99805 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF2Q99805 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TM9SF2Q99805 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF2Q99805 CICP13-201ENST00000422015 2789 ntBASIC14.78□□□□□ -0.04
TM9SF2Q99805 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF2Q99805 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.78□□□□□ -0.04
TM9SF2Q99805 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF2Q99805 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
TM9SF2Q99805 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF2Q99805 MIR346-201ENST00000362234 95 ntBASIC14.78□□□□□ -0.04
TM9SF2Q99805 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF2Q99805 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF2Q99805 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.78□□□□□ -0.04
TM9SF2Q99805 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.78□□□□□ -0.04
TM9SF2Q99805 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.78□□□□□ -0.04
TM9SF2Q99805 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF2Q99805 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.78□□□□□ -0.04
TM9SF2Q99805 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC14.78□□□□□ -0.04
TM9SF2Q99805 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.78□□□□□ -0.04
TM9SF2Q99805 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF2Q99805 AP000842.3-202ENST00000569238 1080 ntBASIC14.78□□□□□ -0.04
TM9SF2Q99805 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.78□□□□□ -0.04
TM9SF2Q99805 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.78□□□□□ -0.04
TM9SF2Q99805 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.78□□□□□ -0.04
TM9SF2Q99805 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF2Q99805 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TM9SF2Q99805 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TM9SF2Q99805 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF2Q99805 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF2Q99805 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.78□□□□□ -0.04
TM9SF2Q99805 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TM9SF2Q99805 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
TM9SF2Q99805 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF2Q99805 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF2Q99805 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.78□□□□□ -0.04
TM9SF2Q99805 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF2Q99805 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF2Q99805 SNX33P1-201ENST00000592116 1762 ntBASIC14.78□□□□□ -0.04
TM9SF2Q99805 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF2Q99805 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF2Q99805 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF2Q99805 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
TM9SF2Q99805 AL512652.2-201ENST00000625156 1716 ntBASIC14.78□□□□□ -0.04
TM9SF2Q99805 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
TM9SF2Q99805 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
TM9SF2Q99805 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TM9SF2Q99805 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
TM9SF2Q99805 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.77□□□□□ -0.04
TM9SF2Q99805 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
TM9SF2Q99805 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TM9SF2Q99805 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.04
TM9SF2Q99805 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TM9SF2Q99805 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.77□□□□□ -0.04
TM9SF2Q99805 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TM9SF2Q99805 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
TM9SF2Q99805 AL031731.1-201ENST00000642131 2094 ntBASIC14.77□□□□□ -0.04
TM9SF2Q99805 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
TM9SF2Q99805 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
TM9SF2Q99805 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
TM9SF2Q99805 TUBB3P1-201ENST00000405796 1332 ntBASIC14.77□□□□□ -0.04
TM9SF2Q99805 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TM9SF2Q99805 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.77□□□□□ -0.05
TM9SF2Q99805 GPS2P2-201ENST00000430745 888 ntBASIC14.77□□□□□ -0.05
TM9SF2Q99805 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.77□□□□□ -0.05
TM9SF2Q99805 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC14.77□□□□□ -0.05
TM9SF2Q99805 SLC25A39P2-201ENST00000537614 270 ntBASIC14.77□□□□□ -0.05
TM9SF2Q99805 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.77□□□□□ -0.05
TM9SF2Q99805 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.77□□□□□ -0.05
TM9SF2Q99805 AC026150.2-201ENST00000564693 1156 ntBASIC14.77□□□□□ -0.05
TM9SF2Q99805 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.77□□□□□ -0.05
TM9SF2Q99805 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TM9SF2Q99805 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.77□□□□□ -0.05
TM9SF2Q99805 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.77□□□□□ -0.05
TM9SF2Q99805 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TM9SF2Q99805 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TM9SF2Q99805 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.05
TM9SF2Q99805 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TM9SF2Q99805 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TM9SF2Q99805 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
TM9SF2Q99805 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TM9SF2Q99805 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
TM9SF2Q99805 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TM9SF2Q99805 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
TM9SF2Q99805 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.77□□□□□ -0.05
TM9SF2Q99805 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.77□□□□□ -0.05
TM9SF2Q99805 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
TM9SF2Q99805 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms