Protein–RNA interactions for Protein: Q99731

CCL19, C-C motif chemokine 19, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL19Q99731 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.28□□□□□ -0.28
CCL19Q99731 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
CCL19Q99731 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.28□□□□□ -0.28
CCL19Q99731 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.28□□□□□ -0.28
CCL19Q99731 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.28□□□□□ -0.28
CCL19Q99731 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCL19Q99731 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.28□□□□□ -0.28
CCL19Q99731 AL139099.5-201ENST00000635274 300 ntBASIC13.28□□□□□ -0.28
CCL19Q99731 ABBA01031663.1-201ENST00000635630 790 ntBASIC13.28□□□□□ -0.28
CCL19Q99731 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC13.28□□□□□ -0.28
CCL19Q99731 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL19Q99731 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCL19Q99731 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL19Q99731 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL19Q99731 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL19Q99731 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCL19Q99731 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCL19Q99731 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.28□□□□□ -0.28
CCL19Q99731 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL19Q99731 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL19Q99731 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
CCL19Q99731 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL19Q99731 DRD5P1-201ENST00000456605 1438 ntBASIC13.28□□□□□ -0.28
CCL19Q99731 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC13.28□□□□□ -0.28
CCL19Q99731 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCL19Q99731 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL19Q99731 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL19Q99731 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL19Q99731 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL19Q99731 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
CCL19Q99731 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
CCL19Q99731 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
CCL19Q99731 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CCL19Q99731 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC13.27□□□□□ -0.28
CCL19Q99731 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC13.27□□□□□ -0.28
CCL19Q99731 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
CCL19Q99731 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC13.27□□□□□ -0.28
CCL19Q99731 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CCL19Q99731 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CCL19Q99731 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
CCL19Q99731 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CCL19Q99731 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC13.27□□□□□ -0.28
CCL19Q99731 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CCL19Q99731 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CCL19Q99731 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
CCL19Q99731 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL19Q99731 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL19Q99731 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL19Q99731 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CCL19Q99731 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL19Q99731 MIR326-201ENST00000362220 95 ntBASIC13.27□□□□□ -0.29
CCL19Q99731 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.27□□□□□ -0.29
CCL19Q99731 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL19Q99731 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC13.27□□□□□ -0.29
CCL19Q99731 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.27□□□□□ -0.29
CCL19Q99731 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC13.27□□□□□ -0.29
CCL19Q99731 FAM86HP-204ENST00000513466 959 ntBASIC13.27□□□□□ -0.29
CCL19Q99731 AP001258.2-201ENST00000529891 490 ntBASIC13.27□□□□□ -0.29
CCL19Q99731 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.27□□□□□ -0.29
CCL19Q99731 AC025279.2-201ENST00000569730 653 ntBASIC13.27□□□□□ -0.29
CCL19Q99731 GNRHR2-203ENST00000581100 1187 ntBASIC13.27□□□□□ -0.29
CCL19Q99731 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC13.27□□□□□ -0.29
CCL19Q99731 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL19Q99731 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.27□□□□□ -0.29
CCL19Q99731 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC13.27□□□□□ -0.29
CCL19Q99731 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.27□□□□□ -0.29
CCL19Q99731 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC13.27□□□□□ -0.29
CCL19Q99731 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.27□□□□□ -0.29
CCL19Q99731 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CCL19Q99731 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
CCL19Q99731 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CCL19Q99731 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL19Q99731 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC13.27□□□□□ -0.29
CCL19Q99731 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CCL19Q99731 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CCL19Q99731 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
CCL19Q99731 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL19Q99731 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.27□□□□□ -0.29
CCL19Q99731 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CCL19Q99731 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
CCL19Q99731 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.27□□□□□ -0.29
CCL19Q99731 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL19Q99731 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL19Q99731 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL19Q99731 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL19Q99731 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.27□□□□□ -0.29
CCL19Q99731 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL19Q99731 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC13.27□□□□□ -0.29
CCL19Q99731 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CCL19Q99731 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL19Q99731 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC13.27□□□□□ -0.29
CCL19Q99731 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC13.27□□□□□ -0.29
CCL19Q99731 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL19Q99731 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL19Q99731 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL19Q99731 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CCL19Q99731 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CCL19Q99731 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC13.26□□□□□ -0.29
CCL19Q99731 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CCL19Q99731 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms