Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.06■□□□□ 0
BBS4Q96RK4 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.06■□□□□ 0
BBS4Q96RK4 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
BBS4Q96RK4 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
BBS4Q96RK4 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.06■□□□□ 0
BBS4Q96RK4 KRT18P13-201ENST00000400056 1290 ntBASIC15.06■□□□□ 0
BBS4Q96RK4 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.06■□□□□ 0
BBS4Q96RK4 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.06■□□□□ 0
BBS4Q96RK4 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.06■□□□□ 0
BBS4Q96RK4 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
BBS4Q96RK4 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.06■□□□□ 0
BBS4Q96RK4 AC023141.5-201ENST00000458585 616 ntBASIC15.06■□□□□ 0
BBS4Q96RK4 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.06■□□□□ 0
BBS4Q96RK4 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC15.06■□□□□ 0
BBS4Q96RK4 SNHG9-202ENST00000564014 471 ntBASIC15.06■□□□□ 0
BBS4Q96RK4 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.06■□□□□ 0
BBS4Q96RK4 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC15.06■□□□□ 0
BBS4Q96RK4 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
BBS4Q96RK4 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
BBS4Q96RK4 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC15.06■□□□□ 0
BBS4Q96RK4 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
BBS4Q96RK4 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
BBS4Q96RK4 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
BBS4Q96RK4 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
BBS4Q96RK4 AC018892.3-201ENST00000623986 2499 ntBASIC15.06■□□□□ 0
BBS4Q96RK4 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.06■□□□□ 0
BBS4Q96RK4 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.06■□□□□ 0
BBS4Q96RK4 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.06■□□□□ 0
BBS4Q96RK4 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.06■□□□□ 0
BBS4Q96RK4 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.06■□□□□ 0
BBS4Q96RK4 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC15.06■□□□□ 0
BBS4Q96RK4 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
BBS4Q96RK4 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
BBS4Q96RK4 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
BBS4Q96RK4 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
BBS4Q96RK4 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.05■□□□□ 0
BBS4Q96RK4 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
BBS4Q96RK4 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.05■□□□□ 0
BBS4Q96RK4 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ 0
BBS4Q96RK4 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.05■□□□□ 0
BBS4Q96RK4 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
BBS4Q96RK4 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
BBS4Q96RK4 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
BBS4Q96RK4 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
BBS4Q96RK4 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
BBS4Q96RK4 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
BBS4Q96RK4 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
BBS4Q96RK4 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC15.05■□□□□ -0
BBS4Q96RK4 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.05■□□□□ -0
BBS4Q96RK4 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
BBS4Q96RK4 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC15.05■□□□□ -0
BBS4Q96RK4 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.05■□□□□ -0
BBS4Q96RK4 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.05■□□□□ -0
BBS4Q96RK4 AC254562.1-201ENST00000417586 456 ntBASIC15.05■□□□□ -0
BBS4Q96RK4 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.05■□□□□ -0
BBS4Q96RK4 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.05■□□□□ -0
BBS4Q96RK4 CNN2P11-201ENST00000429351 262 ntBASIC15.05■□□□□ -0
BBS4Q96RK4 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC15.05■□□□□ -0
BBS4Q96RK4 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC15.05■□□□□ -0
BBS4Q96RK4 GATD1-206ENST00000526325 756 ntTSL 5 BASIC15.05■□□□□ -0
BBS4Q96RK4 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.05■□□□□ -0
BBS4Q96RK4 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.05■□□□□ -0
BBS4Q96RK4 AC105021.1-202ENST00000570572 669 ntBASIC15.05■□□□□ -0
BBS4Q96RK4 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
BBS4Q96RK4 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
BBS4Q96RK4 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.05■□□□□ -0
BBS4Q96RK4 AC009093.7-201ENST00000623853 1223 ntBASIC15.05■□□□□ -0
BBS4Q96RK4 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
BBS4Q96RK4 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.05■□□□□ -0
BBS4Q96RK4 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.05■□□□□ -0
BBS4Q96RK4 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
BBS4Q96RK4 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.05■□□□□ -0
BBS4Q96RK4 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.05■□□□□ -0
BBS4Q96RK4 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC15.05■□□□□ -0
BBS4Q96RK4 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
BBS4Q96RK4 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
BBS4Q96RK4 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
BBS4Q96RK4 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
BBS4Q96RK4 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.05■□□□□ -0
BBS4Q96RK4 AC103702.1-201ENST00000548801 2630 ntBASIC15.05■□□□□ -0
BBS4Q96RK4 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.05■□□□□ -0
BBS4Q96RK4 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
BBS4Q96RK4 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
BBS4Q96RK4 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.04■□□□□ -0
BBS4Q96RK4 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.04■□□□□ -0
BBS4Q96RK4 AC092850.2-201ENST00000623821 2697 ntBASIC15.04■□□□□ -0
BBS4Q96RK4 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15.04■□□□□ -0
BBS4Q96RK4 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.04■□□□□ -0
BBS4Q96RK4 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
BBS4Q96RK4 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
BBS4Q96RK4 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.04■□□□□ -0
BBS4Q96RK4 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.04■□□□□ -0
BBS4Q96RK4 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.04■□□□□ -0
BBS4Q96RK4 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
BBS4Q96RK4 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.04■□□□□ -0
BBS4Q96RK4 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
BBS4Q96RK4 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
BBS4Q96RK4 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
BBS4Q96RK4 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
BBS4Q96RK4 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms