Protein–RNA interactions for Protein: Q96MD7

C9orf85, Uncharacterized protein C9orf85, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85Q96MD7 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC11.5□□□□□ -0.57
C9orf85Q96MD7 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
C9orf85Q96MD7 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
C9orf85Q96MD7 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
C9orf85Q96MD7 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
C9orf85Q96MD7 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
C9orf85Q96MD7 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
C9orf85Q96MD7 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
C9orf85Q96MD7 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 PTMS-202ENST00000389462 773 ntTSL 2 BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 AL590627.1-203ENST00000421194 1026 ntBASIC11.49□□□□□ -0.57
C9orf85Q96MD7 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 SPDYE11-202ENST00000450699 704 ntBASIC11.49□□□□□ -0.57
C9orf85Q96MD7 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 HNRNPUP1-201ENST00000554987 333 ntBASIC11.49□□□□□ -0.57
C9orf85Q96MD7 KRT8P23-201ENST00000560090 1207 ntBASIC11.49□□□□□ -0.57
C9orf85Q96MD7 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 COX5A-206ENST00000568783 571 ntTSL 3 BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 SPDYE9P-201ENST00000570642 692 ntBASIC11.49□□□□□ -0.57
C9orf85Q96MD7 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 SSH2-211ENST00000590153 570 ntTSL 4 BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 SPDYE10P-202ENST00000612005 668 ntBASIC11.49□□□□□ -0.57
C9orf85Q96MD7 SPDYE8P-202ENST00000612377 668 ntBASIC11.49□□□□□ -0.57
C9orf85Q96MD7 CAND2-206ENST00000626378 333 ntTSL 5 BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 C1R-202ENST00000536053 2347 ntTSL 2 BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 AC091951.1-201ENST00000512854 2465 ntBASIC11.49□□□□□ -0.57
C9orf85Q96MD7 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 AC148477.4-201ENST00000613430 1793 ntBASIC11.49□□□□□ -0.57
C9orf85Q96MD7 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC11.49□□□□□ -0.57
C9orf85Q96MD7 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
C9orf85Q96MD7 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC11.48□□□□□ -0.57
C9orf85Q96MD7 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
C9orf85Q96MD7 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC11.48□□□□□ -0.57
C9orf85Q96MD7 CELP-203ENST00000624767 2414 ntTSL 5 BASIC11.48□□□□□ -0.57
C9orf85Q96MD7 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
C9orf85Q96MD7 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
C9orf85Q96MD7 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
C9orf85Q96MD7 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
C9orf85Q96MD7 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
C9orf85Q96MD7 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
C9orf85Q96MD7 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
C9orf85Q96MD7 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC11.48□□□□□ -0.57
C9orf85Q96MD7 SPCS2P4-201ENST00000436160 681 ntBASIC11.48□□□□□ -0.57
C9orf85Q96MD7 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC11.48□□□□□ -0.57
C9orf85Q96MD7 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC11.48□□□□□ -0.57
C9orf85Q96MD7 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
C9orf85Q96MD7 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC11.48□□□□□ -0.57
C9orf85Q96MD7 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC11.48□□□□□ -0.57
C9orf85Q96MD7 LINC01225-203ENST00000563550 1244 ntBASIC11.48□□□□□ -0.57
C9orf85Q96MD7 AC106730.1-201ENST00000566722 1090 ntBASIC11.48□□□□□ -0.57
C9orf85Q96MD7 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC11.48□□□□□ -0.57
C9orf85Q96MD7 NAA38-207ENST00000576861 556 ntTSL 3 BASIC11.48□□□□□ -0.57
C9orf85Q96MD7 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC11.48□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms