Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 AL158070.2-201ENST00000623713 1621 ntBASIC16.82■□□□□ 0.28
ALPK3Q96L96 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ALPK3Q96L96 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.82■□□□□ 0.28
ALPK3Q96L96 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC16.82■□□□□ 0.28
ALPK3Q96L96 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ALPK3Q96L96 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
ALPK3Q96L96 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC16.82■□□□□ 0.28
ALPK3Q96L96 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ALPK3Q96L96 MIR3677-201ENST00000578964 60 ntBASIC16.82■□□□□ 0.28
ALPK3Q96L96 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ALPK3Q96L96 AC004466.1-201ENST00000599515 1080 ntBASIC16.82■□□□□ 0.28
ALPK3Q96L96 MEG3_2.1-201ENST00000611456 105 ntBASIC16.82■□□□□ 0.28
ALPK3Q96L96 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.82■□□□□ 0.28
ALPK3Q96L96 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.81■□□□□ 0.28
ALPK3Q96L96 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.81■□□□□ 0.28
ALPK3Q96L96 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ALPK3Q96L96 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ALPK3Q96L96 CLUHP2-201ENST00000426660 1303 ntBASIC16.81■□□□□ 0.28
ALPK3Q96L96 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.81■□□□□ 0.28
ALPK3Q96L96 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ALPK3Q96L96 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.81■□□□□ 0.28
ALPK3Q96L96 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ALPK3Q96L96 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ALPK3Q96L96 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.81■□□□□ 0.28
ALPK3Q96L96 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.81■□□□□ 0.28
ALPK3Q96L96 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.81■□□□□ 0.28
ALPK3Q96L96 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ALPK3Q96L96 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ALPK3Q96L96 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
ALPK3Q96L96 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ALPK3Q96L96 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
ALPK3Q96L96 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ALPK3Q96L96 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
ALPK3Q96L96 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ALPK3Q96L96 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.81■□□□□ 0.28
ALPK3Q96L96 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC16.81■□□□□ 0.28
ALPK3Q96L96 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.81■□□□□ 0.28
ALPK3Q96L96 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC16.81■□□□□ 0.28
ALPK3Q96L96 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC16.81■□□□□ 0.28
ALPK3Q96L96 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ALPK3Q96L96 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ALPK3Q96L96 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ALPK3Q96L96 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ALPK3Q96L96 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ALPK3Q96L96 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ALPK3Q96L96 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
ALPK3Q96L96 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC16.81■□□□□ 0.28
ALPK3Q96L96 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.81■□□□□ 0.28
ALPK3Q96L96 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.81■□□□□ 0.28
ALPK3Q96L96 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ALPK3Q96L96 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
ALPK3Q96L96 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ALPK3Q96L96 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.8■□□□□ 0.28
ALPK3Q96L96 SOD2-202ENST00000367054 815 ntTSL 2 BASIC16.8■□□□□ 0.28
ALPK3Q96L96 HNRNPA1P41-201ENST00000397777 928 ntBASIC16.8■□□□□ 0.28
ALPK3Q96L96 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC16.8■□□□□ 0.28
ALPK3Q96L96 AC021723.1-201ENST00000486306 515 ntBASIC16.8■□□□□ 0.28
ALPK3Q96L96 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC16.8■□□□□ 0.28
ALPK3Q96L96 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC16.8■□□□□ 0.28
ALPK3Q96L96 FOS-204ENST00000554617 796 ntTSL 2 BASIC16.8■□□□□ 0.28
ALPK3Q96L96 DNM1P30-201ENST00000563586 452 ntBASIC16.8■□□□□ 0.28
ALPK3Q96L96 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ALPK3Q96L96 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.8■□□□□ 0.28
ALPK3Q96L96 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC16.8■□□□□ 0.28
ALPK3Q96L96 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ALPK3Q96L96 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ALPK3Q96L96 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ALPK3Q96L96 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
ALPK3Q96L96 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.8■□□□□ 0.28
ALPK3Q96L96 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ALPK3Q96L96 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ALPK3Q96L96 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ALPK3Q96L96 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ALPK3Q96L96 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ALPK3Q96L96 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ALPK3Q96L96 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ALPK3Q96L96 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ALPK3Q96L96 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC16.8■□□□□ 0.28
ALPK3Q96L96 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC16.8■□□□□ 0.28
ALPK3Q96L96 NSD1-211ENST00000511258 809 ntTSL 3 BASIC16.8■□□□□ 0.28
ALPK3Q96L96 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC16.8■□□□□ 0.28
ALPK3Q96L96 MIR4649-201ENST00000582839 64 ntBASIC16.8■□□□□ 0.28
ALPK3Q96L96 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ALPK3Q96L96 AC004923.1-202ENST00000642106 209 ntBASIC16.8■□□□□ 0.28
ALPK3Q96L96 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
ALPK3Q96L96 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ALPK3Q96L96 AC074138.1-201ENST00000611182 1303 ntBASIC16.79■□□□□ 0.28
ALPK3Q96L96 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ALPK3Q96L96 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.79■□□□□ 0.28
ALPK3Q96L96 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
ALPK3Q96L96 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ALPK3Q96L96 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ALPK3Q96L96 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ALPK3Q96L96 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ALPK3Q96L96 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ALPK3Q96L96 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC16.79■□□□□ 0.28
ALPK3Q96L96 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ALPK3Q96L96 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC16.79■□□□□ 0.28
ALPK3Q96L96 OR2K2-202ENST00000374428 1038 ntBASIC16.79■□□□□ 0.28
ALPK3Q96L96 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms