Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.44■□□□□ 0.06
PDLIM5Q96HC4 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PDLIM5Q96HC4 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDLIM5Q96HC4 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDLIM5Q96HC4 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDLIM5Q96HC4 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDLIM5Q96HC4 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
PDLIM5Q96HC4 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PDLIM5Q96HC4 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.44■□□□□ 0.06
PDLIM5Q96HC4 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PDLIM5Q96HC4 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.44■□□□□ 0.06
PDLIM5Q96HC4 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.44■□□□□ 0.06
PDLIM5Q96HC4 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC15.44■□□□□ 0.06
PDLIM5Q96HC4 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.44■□□□□ 0.06
PDLIM5Q96HC4 AC025678.2-201ENST00000562061 970 ntBASIC15.44■□□□□ 0.06
PDLIM5Q96HC4 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
PDLIM5Q96HC4 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.44■□□□□ 0.06
PDLIM5Q96HC4 AC025048.3-201ENST00000590609 569 ntBASIC15.44■□□□□ 0.06
PDLIM5Q96HC4 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDLIM5Q96HC4 AC005702.4-201ENST00000618393 416 ntBASIC15.44■□□□□ 0.06
PDLIM5Q96HC4 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDLIM5Q96HC4 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC15.44■□□□□ 0.06
PDLIM5Q96HC4 FO538757.1-201ENST00000623083 1397 ntBASIC15.44■□□□□ 0.06
PDLIM5Q96HC4 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDLIM5Q96HC4 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDLIM5Q96HC4 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDLIM5Q96HC4 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDLIM5Q96HC4 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
PDLIM5Q96HC4 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDLIM5Q96HC4 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDLIM5Q96HC4 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.44■□□□□ 0.06
PDLIM5Q96HC4 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
PDLIM5Q96HC4 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDLIM5Q96HC4 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDLIM5Q96HC4 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PDLIM5Q96HC4 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.44■□□□□ 0.06
PDLIM5Q96HC4 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDLIM5Q96HC4 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PDLIM5Q96HC4 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 MIR1233-2-201ENST00000408138 82 ntBASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 MIR1233-1-201ENST00000408722 82 ntBASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 AC074338.1-201ENST00000416825 156 ntBASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 CNN2P2-201ENST00000443536 909 ntBASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 CNN2P3-201ENST00000450201 906 ntBASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 AL136317.3-201ENST00000618497 906 ntBASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 AC099063.4-201ENST00000641099 1602 ntBASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 TUBB3P1-201ENST00000405796 1332 ntBASIC15.43■□□□□ 0.06
PDLIM5Q96HC4 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
PDLIM5Q96HC4 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC15.42■□□□□ 0.06
PDLIM5Q96HC4 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
PDLIM5Q96HC4 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.42■□□□□ 0.06
PDLIM5Q96HC4 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms