Protein–RNA interactions for Protein: Q8WYL5

SSH1, Protein phosphatase Slingshot homolog 1, humanhuman

Predictions only

Length 1,049 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1Q8WYL5 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
SSH1Q8WYL5 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SSH1Q8WYL5 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SSH1Q8WYL5 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SSH1Q8WYL5 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
SSH1Q8WYL5 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SSH1Q8WYL5 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
SSH1Q8WYL5 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
SSH1Q8WYL5 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC20.15■□□□□ 0.82
SSH1Q8WYL5 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SSH1Q8WYL5 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC20.15■□□□□ 0.82
SSH1Q8WYL5 SRD5A3P1-201ENST00000603021 949 ntBASIC20.15■□□□□ 0.82
SSH1Q8WYL5 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC20.15■□□□□ 0.82
SSH1Q8WYL5 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC20.15■□□□□ 0.82
SSH1Q8WYL5 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SSH1Q8WYL5 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SSH1Q8WYL5 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC20.15■□□□□ 0.82
SSH1Q8WYL5 TMBIM7P-203ENST00000641617 1718 ntBASIC20.15■□□□□ 0.82
SSH1Q8WYL5 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SSH1Q8WYL5 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC20.15■□□□□ 0.82
SSH1Q8WYL5 AC126177.1-201ENST00000547829 2218 ntBASIC20.15■□□□□ 0.82
SSH1Q8WYL5 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
SSH1Q8WYL5 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC20.15■□□□□ 0.82
SSH1Q8WYL5 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
SSH1Q8WYL5 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SSH1Q8WYL5 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC20.15■□□□□ 0.82
SSH1Q8WYL5 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SSH1Q8WYL5 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
SSH1Q8WYL5 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.82
SSH1Q8WYL5 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SSH1Q8WYL5 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SSH1Q8WYL5 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.82
SSH1Q8WYL5 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
SSH1Q8WYL5 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
SSH1Q8WYL5 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
SSH1Q8WYL5 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC20.14■□□□□ 0.81
SSH1Q8WYL5 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.81
SSH1Q8WYL5 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC20.14■□□□□ 0.81
SSH1Q8WYL5 AC022532.1-201ENST00000624563 1728 ntBASIC20.14■□□□□ 0.81
SSH1Q8WYL5 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SSH1Q8WYL5 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SSH1Q8WYL5 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SSH1Q8WYL5 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SSH1Q8WYL5 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SSH1Q8WYL5 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SSH1Q8WYL5 SYS1-203ENST00000414310 795 ntTSL 3 BASIC20.14■□□□□ 0.81
SSH1Q8WYL5 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
SSH1Q8WYL5 BCRP1-201ENST00000444246 691 ntBASIC20.14■□□□□ 0.81
SSH1Q8WYL5 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
SSH1Q8WYL5 INGX-202ENST00000489074 768 ntBASIC20.14■□□□□ 0.81
SSH1Q8WYL5 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC20.14■□□□□ 0.81
SSH1Q8WYL5 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC20.14■□□□□ 0.81
SSH1Q8WYL5 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC20.14■□□□□ 0.81
SSH1Q8WYL5 AC104794.3-201ENST00000566840 1248 ntBASIC20.14■□□□□ 0.81
SSH1Q8WYL5 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC20.14■□□□□ 0.81
SSH1Q8WYL5 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC20.14■□□□□ 0.81
SSH1Q8WYL5 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SSH1Q8WYL5 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC20.14■□□□□ 0.81
SSH1Q8WYL5 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SSH1Q8WYL5 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SSH1Q8WYL5 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SSH1Q8WYL5 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SSH1Q8WYL5 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SSH1Q8WYL5 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SSH1Q8WYL5 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC20.14■□□□□ 0.81
SSH1Q8WYL5 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SSH1Q8WYL5 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SSH1Q8WYL5 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC20.14■□□□□ 0.81
SSH1Q8WYL5 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
SSH1Q8WYL5 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC20.13■□□□□ 0.81
SSH1Q8WYL5 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
SSH1Q8WYL5 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC20.13■□□□□ 0.81
SSH1Q8WYL5 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC20.13■□□□□ 0.81
SSH1Q8WYL5 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SSH1Q8WYL5 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SSH1Q8WYL5 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SSH1Q8WYL5 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC20.13■□□□□ 0.81
SSH1Q8WYL5 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SSH1Q8WYL5 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SSH1Q8WYL5 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SSH1Q8WYL5 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SSH1Q8WYL5 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SSH1Q8WYL5 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC20.13■□□□□ 0.81
SSH1Q8WYL5 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC20.13■□□□□ 0.81
SSH1Q8WYL5 RNA5SP421-201ENST00000516864 134 ntBASIC20.13■□□□□ 0.81
SSH1Q8WYL5 REEP4-207ENST00000523293 913 ntTSL 3 BASIC20.13■□□□□ 0.81
SSH1Q8WYL5 FTH1-202ENST00000526640 786 ntTSL 2 BASIC20.13■□□□□ 0.81
SSH1Q8WYL5 SPCS2P1-201ENST00000561636 679 ntBASIC20.13■□□□□ 0.81
SSH1Q8WYL5 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC20.13■□□□□ 0.81
SSH1Q8WYL5 AL391069.4-201ENST00000609583 481 ntBASIC20.13■□□□□ 0.81
SSH1Q8WYL5 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SSH1Q8WYL5 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SSH1Q8WYL5 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SSH1Q8WYL5 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
SSH1Q8WYL5 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SSH1Q8WYL5 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SSH1Q8WYL5 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
SSH1Q8WYL5 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
SSH1Q8WYL5 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SSH1Q8WYL5 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms