Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CASKIN1Q8WXD9 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
CASKIN1Q8WXD9 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CASKIN1Q8WXD9 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC24.1■■□□□ 1.45
CASKIN1Q8WXD9 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CASKIN1Q8WXD9 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
CASKIN1Q8WXD9 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CASKIN1Q8WXD9 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CASKIN1Q8WXD9 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC24.1■■□□□ 1.45
CASKIN1Q8WXD9 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC24.1■■□□□ 1.45
CASKIN1Q8WXD9 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CASKIN1Q8WXD9 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC24.1■■□□□ 1.45
CASKIN1Q8WXD9 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CASKIN1Q8WXD9 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
CASKIN1Q8WXD9 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
CASKIN1Q8WXD9 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CASKIN1Q8WXD9 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
CASKIN1Q8WXD9 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
CASKIN1Q8WXD9 MPV17-205ENST00000402310 906 ntTSL 5 BASIC24.1■■□□□ 1.45
CASKIN1Q8WXD9 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC24.1■■□□□ 1.45
CASKIN1Q8WXD9 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
CASKIN1Q8WXD9 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC24.1■■□□□ 1.45
CASKIN1Q8WXD9 AP006547.1-201ENST00000563435 692 ntBASIC24.1■■□□□ 1.45
CASKIN1Q8WXD9 MIR3615-201ENST00000581999 87 ntBASIC24.1■■□□□ 1.45
CASKIN1Q8WXD9 AL096828.3-201ENST00000615354 462 ntBASIC24.1■■□□□ 1.45
CASKIN1Q8WXD9 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC24.09■■□□□ 1.45
CASKIN1Q8WXD9 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC24.09■■□□□ 1.45
CASKIN1Q8WXD9 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
CASKIN1Q8WXD9 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
CASKIN1Q8WXD9 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CASKIN1Q8WXD9 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CASKIN1Q8WXD9 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CASKIN1Q8WXD9 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC24.09■■□□□ 1.45
CASKIN1Q8WXD9 HARS-202ENST00000415192 1401 ntTSL 2 BASIC24.09■■□□□ 1.45
CASKIN1Q8WXD9 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CASKIN1Q8WXD9 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CASKIN1Q8WXD9 AC018735.1-201ENST00000437208 1502 ntBASIC24.09■■□□□ 1.45
CASKIN1Q8WXD9 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
CASKIN1Q8WXD9 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CASKIN1Q8WXD9 RPS3-201ENST00000278572 907 ntTSL 3 BASIC24.09■■□□□ 1.45
CASKIN1Q8WXD9 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC24.09■■□□□ 1.45
CASKIN1Q8WXD9 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC24.09■■□□□ 1.45
CASKIN1Q8WXD9 RPL5P21-201ENST00000404620 815 ntBASIC24.09■■□□□ 1.45
CASKIN1Q8WXD9 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC24.09■■□□□ 1.45
CASKIN1Q8WXD9 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC24.09■■□□□ 1.45
CASKIN1Q8WXD9 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC24.09■■□□□ 1.45
CASKIN1Q8WXD9 KC6-205ENST00000599934 556 ntTSL 4 BASIC24.09■■□□□ 1.45
CASKIN1Q8WXD9 AC073413.1-201ENST00000603927 732 ntBASIC24.09■■□□□ 1.45
CASKIN1Q8WXD9 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC24.09■■□□□ 1.45
CASKIN1Q8WXD9 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CASKIN1Q8WXD9 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CASKIN1Q8WXD9 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC24.08■■□□□ 1.45
CASKIN1Q8WXD9 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CASKIN1Q8WXD9 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CASKIN1Q8WXD9 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CASKIN1Q8WXD9 AC099398.1-201ENST00000567919 2776 ntBASIC24.08■■□□□ 1.45
CASKIN1Q8WXD9 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC24.08■■□□□ 1.45
CASKIN1Q8WXD9 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.45
CASKIN1Q8WXD9 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CASKIN1Q8WXD9 AL354989.2-201ENST00000435838 1540 ntBASIC24.08■■□□□ 1.45
CASKIN1Q8WXD9 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CASKIN1Q8WXD9 AL023775.1-201ENST00000454907 1746 ntBASIC24.08■■□□□ 1.45
CASKIN1Q8WXD9 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
CASKIN1Q8WXD9 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
CASKIN1Q8WXD9 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.44
CASKIN1Q8WXD9 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
CASKIN1Q8WXD9 SNX21-203ENST00000372541 771 ntTSL 2 BASIC24.08■■□□□ 1.44
CASKIN1Q8WXD9 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.44
CASKIN1Q8WXD9 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC24.08■■□□□ 1.44
CASKIN1Q8WXD9 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC24.08■■□□□ 1.44
CASKIN1Q8WXD9 HOMER2P2-201ENST00000451621 847 ntBASIC24.08■■□□□ 1.44
CASKIN1Q8WXD9 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
CASKIN1Q8WXD9 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC24.08■■□□□ 1.44
CASKIN1Q8WXD9 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC24.08■■□□□ 1.44
CASKIN1Q8WXD9 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC24.08■■□□□ 1.44
CASKIN1Q8WXD9 AL603764.1-201ENST00000636452 321 ntBASIC24.08■■□□□ 1.44
CASKIN1Q8WXD9 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
CASKIN1Q8WXD9 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
CASKIN1Q8WXD9 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC24.08■■□□□ 1.44
CASKIN1Q8WXD9 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
CASKIN1Q8WXD9 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
CASKIN1Q8WXD9 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.44
CASKIN1Q8WXD9 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.44
CASKIN1Q8WXD9 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CASKIN1Q8WXD9 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC24.07■■□□□ 1.44
CASKIN1Q8WXD9 LRRC59-203ENST00000576448 1531 ntBASIC24.07■■□□□ 1.44
CASKIN1Q8WXD9 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC24.07■■□□□ 1.44
CASKIN1Q8WXD9 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CASKIN1Q8WXD9 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC24.07■■□□□ 1.44
CASKIN1Q8WXD9 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CASKIN1Q8WXD9 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC24.07■■□□□ 1.44
CASKIN1Q8WXD9 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CASKIN1Q8WXD9 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CASKIN1Q8WXD9 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
CASKIN1Q8WXD9 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CASKIN1Q8WXD9 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC24.07■■□□□ 1.44
CASKIN1Q8WXD9 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC24.07■■□□□ 1.44
CASKIN1Q8WXD9 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
CASKIN1Q8WXD9 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC24.07■■□□□ 1.44
CASKIN1Q8WXD9 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms