Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
SMIM4Q8WVI0 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM4Q8WVI0 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM4Q8WVI0 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM4Q8WVI0 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM4Q8WVI0 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
SMIM4Q8WVI0 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM4Q8WVI0 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.57□□□□□ -0.24
SMIM4Q8WVI0 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC13.57□□□□□ -0.24
SMIM4Q8WVI0 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM4Q8WVI0 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM4Q8WVI0 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC13.57□□□□□ -0.24
SMIM4Q8WVI0 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
SMIM4Q8WVI0 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.57□□□□□ -0.24
SMIM4Q8WVI0 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
SMIM4Q8WVI0 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.57□□□□□ -0.24
SMIM4Q8WVI0 AL928921.2-201ENST00000641325 2442 ntBASIC13.57□□□□□ -0.24
SMIM4Q8WVI0 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM4Q8WVI0 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM4Q8WVI0 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM4Q8WVI0 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC13.57□□□□□ -0.24
SMIM4Q8WVI0 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM4Q8WVI0 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.57□□□□□ -0.24
SMIM4Q8WVI0 PMS2P4-201ENST00000412466 1052 ntBASIC13.57□□□□□ -0.24
SMIM4Q8WVI0 RBM17P3-201ENST00000417687 1192 ntBASIC13.57□□□□□ -0.24
SMIM4Q8WVI0 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
SMIM4Q8WVI0 HS6ST1P1-201ENST00000481504 1234 ntBASIC13.57□□□□□ -0.24
SMIM4Q8WVI0 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC13.57□□□□□ -0.24
SMIM4Q8WVI0 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.57□□□□□ -0.24
SMIM4Q8WVI0 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM4Q8WVI0 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
SMIM4Q8WVI0 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM4Q8WVI0 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC13.57□□□□□ -0.24
SMIM4Q8WVI0 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM4Q8WVI0 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
SMIM4Q8WVI0 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM4Q8WVI0 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
SMIM4Q8WVI0 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM4Q8WVI0 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.57□□□□□ -0.24
SMIM4Q8WVI0 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM4Q8WVI0 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC13.57□□□□□ -0.24
SMIM4Q8WVI0 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM4Q8WVI0 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM4Q8WVI0 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM4Q8WVI0 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC13.57□□□□□ -0.24
SMIM4Q8WVI0 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM4Q8WVI0 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM4Q8WVI0 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM4Q8WVI0 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM4Q8WVI0 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
SMIM4Q8WVI0 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM4Q8WVI0 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
SMIM4Q8WVI0 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.57□□□□□ -0.24
SMIM4Q8WVI0 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.56□□□□□ -0.24
SMIM4Q8WVI0 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC13.56□□□□□ -0.24
SMIM4Q8WVI0 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SMIM4Q8WVI0 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SMIM4Q8WVI0 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SMIM4Q8WVI0 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC13.56□□□□□ -0.24
SMIM4Q8WVI0 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
SMIM4Q8WVI0 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
SMIM4Q8WVI0 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
SMIM4Q8WVI0 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
SMIM4Q8WVI0 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SMIM4Q8WVI0 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SMIM4Q8WVI0 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SMIM4Q8WVI0 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC13.56□□□□□ -0.24
SMIM4Q8WVI0 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
SMIM4Q8WVI0 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SMIM4Q8WVI0 FXN-203ENST00000396366 922 ntTSL 2 BASIC13.56□□□□□ -0.24
SMIM4Q8WVI0 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC13.56□□□□□ -0.24
SMIM4Q8WVI0 MSRA-206ENST00000521209 814 ntTSL 3 BASIC13.56□□□□□ -0.24
SMIM4Q8WVI0 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC13.56□□□□□ -0.24
SMIM4Q8WVI0 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC13.56□□□□□ -0.24
SMIM4Q8WVI0 LTBR-211ENST00000543190 785 ntTSL 3 BASIC13.56□□□□□ -0.24
SMIM4Q8WVI0 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.56□□□□□ -0.24
SMIM4Q8WVI0 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC13.56□□□□□ -0.24
SMIM4Q8WVI0 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
SMIM4Q8WVI0 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
SMIM4Q8WVI0 AC099336.1-202ENST00000602961 463 ntBASIC13.56□□□□□ -0.24
SMIM4Q8WVI0 AC133561.5-201ENST00000635547 218 ntBASIC13.56□□□□□ -0.24
SMIM4Q8WVI0 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.56□□□□□ -0.24
SMIM4Q8WVI0 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.56□□□□□ -0.24
SMIM4Q8WVI0 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SMIM4Q8WVI0 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SMIM4Q8WVI0 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SMIM4Q8WVI0 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
SMIM4Q8WVI0 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.56□□□□□ -0.24
SMIM4Q8WVI0 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
SMIM4Q8WVI0 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SMIM4Q8WVI0 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.56□□□□□ -0.24
SMIM4Q8WVI0 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SMIM4Q8WVI0 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC13.56□□□□□ -0.24
SMIM4Q8WVI0 WASH3P-207ENST00000560956 1394 ntBASIC13.56□□□□□ -0.24
SMIM4Q8WVI0 FO538757.1-201ENST00000623083 1397 ntBASIC13.56□□□□□ -0.24
SMIM4Q8WVI0 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.56□□□□□ -0.24
SMIM4Q8WVI0 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
SMIM4Q8WVI0 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
SMIM4Q8WVI0 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
SMIM4Q8WVI0 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms