Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
PCDH19Q8TAB3 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH19Q8TAB3 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.33■□□□□ 0.2
PCDH19Q8TAB3 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDH19Q8TAB3 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH19Q8TAB3 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH19Q8TAB3 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDH19Q8TAB3 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDH19Q8TAB3 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
PCDH19Q8TAB3 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
PCDH19Q8TAB3 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
PCDH19Q8TAB3 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH19Q8TAB3 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDH19Q8TAB3 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDH19Q8TAB3 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDH19Q8TAB3 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDH19Q8TAB3 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH19Q8TAB3 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH19Q8TAB3 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDH19Q8TAB3 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH19Q8TAB3 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDH19Q8TAB3 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDH19Q8TAB3 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
PCDH19Q8TAB3 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH19Q8TAB3 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH19Q8TAB3 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
PCDH19Q8TAB3 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDH19Q8TAB3 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH19Q8TAB3 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDH19Q8TAB3 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
PCDH19Q8TAB3 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 TUBB3P1-201ENST00000405796 1332 ntBASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 AL109954.1-202ENST00000564051 2148 ntBASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 AL390955.2-201ENST00000603032 514 ntBASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 AL096865.1-201ENST00000606796 927 ntBASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 SPDYE12P-201ENST00000618416 771 ntBASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 AC138035.3-201ENST00000622706 2791 ntBASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDH19Q8TAB3 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH19Q8TAB3 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH19Q8TAB3 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH19Q8TAB3 AC006486.2-201ENST00000624246 2199 ntBASIC16.31■□□□□ 0.2
PCDH19Q8TAB3 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PCDH19Q8TAB3 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDH19Q8TAB3 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH19Q8TAB3 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDH19Q8TAB3 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDH19Q8TAB3 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDH19Q8TAB3 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PCDH19Q8TAB3 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDH19Q8TAB3 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms