Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SRFBP1Q8NEF9 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SRFBP1Q8NEF9 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
SRFBP1Q8NEF9 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
SRFBP1Q8NEF9 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
SRFBP1Q8NEF9 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SRFBP1Q8NEF9 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SRFBP1Q8NEF9 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
SRFBP1Q8NEF9 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SRFBP1Q8NEF9 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SRFBP1Q8NEF9 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SRFBP1Q8NEF9 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SRFBP1Q8NEF9 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SRFBP1Q8NEF9 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SRFBP1Q8NEF9 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SRFBP1Q8NEF9 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SRFBP1Q8NEF9 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
SRFBP1Q8NEF9 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.15■□□□□ 0.02
SRFBP1Q8NEF9 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.15■□□□□ 0.02
SRFBP1Q8NEF9 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.15■□□□□ 0.02
SRFBP1Q8NEF9 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.15■□□□□ 0.02
SRFBP1Q8NEF9 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SRFBP1Q8NEF9 AC073592.8-201ENST00000624126 511 ntBASIC15.15■□□□□ 0.02
SRFBP1Q8NEF9 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
SRFBP1Q8NEF9 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
SRFBP1Q8NEF9 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC15.15■□□□□ 0.02
SRFBP1Q8NEF9 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.15■□□□□ 0.02
SRFBP1Q8NEF9 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SRFBP1Q8NEF9 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SRFBP1Q8NEF9 PRAL-201ENST00000624952 3286 ntBASIC15.15■□□□□ 0.02
SRFBP1Q8NEF9 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SRFBP1Q8NEF9 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SRFBP1Q8NEF9 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SRFBP1Q8NEF9 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SRFBP1Q8NEF9 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
SRFBP1Q8NEF9 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SRFBP1Q8NEF9 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SRFBP1Q8NEF9 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
SRFBP1Q8NEF9 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
SRFBP1Q8NEF9 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
SRFBP1Q8NEF9 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SRFBP1Q8NEF9 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SRFBP1Q8NEF9 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
SRFBP1Q8NEF9 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC15.14■□□□□ 0.01
SRFBP1Q8NEF9 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SRFBP1Q8NEF9 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SRFBP1Q8NEF9 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SRFBP1Q8NEF9 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
SRFBP1Q8NEF9 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SRFBP1Q8NEF9 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.14■□□□□ 0.01
SRFBP1Q8NEF9 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SRFBP1Q8NEF9 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SRFBP1Q8NEF9 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SRFBP1Q8NEF9 WRB-204ENST00000398753 699 ntTSL 3 BASIC15.14■□□□□ 0.01
SRFBP1Q8NEF9 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.14■□□□□ 0.01
SRFBP1Q8NEF9 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SRFBP1Q8NEF9 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SRFBP1Q8NEF9 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC15.14■□□□□ 0.01
SRFBP1Q8NEF9 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.14■□□□□ 0.01
SRFBP1Q8NEF9 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.14■□□□□ 0.01
SRFBP1Q8NEF9 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC15.14■□□□□ 0.01
SRFBP1Q8NEF9 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.14■□□□□ 0.01
SRFBP1Q8NEF9 AL158211.3-201ENST00000607385 239 ntBASIC15.14■□□□□ 0.01
SRFBP1Q8NEF9 AC093028.1-201ENST00000622998 982 ntBASIC15.14■□□□□ 0.01
SRFBP1Q8NEF9 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SRFBP1Q8NEF9 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SRFBP1Q8NEF9 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
SRFBP1Q8NEF9 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SRFBP1Q8NEF9 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SRFBP1Q8NEF9 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.14■□□□□ 0.01
SRFBP1Q8NEF9 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.14■□□□□ 0.01
SRFBP1Q8NEF9 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.14■□□□□ 0.01
SRFBP1Q8NEF9 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC15.14■□□□□ 0.01
SRFBP1Q8NEF9 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC15.14■□□□□ 0.01
SRFBP1Q8NEF9 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
SRFBP1Q8NEF9 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.14■□□□□ 0.01
SRFBP1Q8NEF9 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SRFBP1Q8NEF9 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SRFBP1Q8NEF9 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SRFBP1Q8NEF9 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRFBP1Q8NEF9 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRFBP1Q8NEF9 DKFZP434H168-201ENST00000567381 1905 ntBASIC15.13■□□□□ 0.01
SRFBP1Q8NEF9 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRFBP1Q8NEF9 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRFBP1Q8NEF9 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SRFBP1Q8NEF9 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SRFBP1Q8NEF9 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
SRFBP1Q8NEF9 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRFBP1Q8NEF9 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRFBP1Q8NEF9 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SRFBP1Q8NEF9 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.13■□□□□ 0.01
SRFBP1Q8NEF9 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRFBP1Q8NEF9 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRFBP1Q8NEF9 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRFBP1Q8NEF9 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRFBP1Q8NEF9 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SRFBP1Q8NEF9 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SRFBP1Q8NEF9 AZGP1P1-201ENST00000411909 902 ntBASIC15.13■□□□□ 0.01
SRFBP1Q8NEF9 AC136604.1-201ENST00000418535 575 ntBASIC15.13■□□□□ 0.01
SRFBP1Q8NEF9 AL645939.2-201ENST00000427340 991 ntBASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms