Protein–RNA interactions for Protein: Q8N7R7

CCNYL1, Cyclin-Y-like protein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL1Q8N7R7 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
CCNYL1Q8N7R7 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.71■□□□□ 0.11
CCNYL1Q8N7R7 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCNYL1Q8N7R7 AC007967.2-201ENST00000432613 625 ntBASIC15.71■□□□□ 0.11
CCNYL1Q8N7R7 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCNYL1Q8N7R7 SMN2-210ENST00000511812 867 ntTSL 2 BASIC15.71■□□□□ 0.11
CCNYL1Q8N7R7 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CCNYL1Q8N7R7 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
CCNYL1Q8N7R7 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.71■□□□□ 0.11
CCNYL1Q8N7R7 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
CCNYL1Q8N7R7 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
CCNYL1Q8N7R7 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCNYL1Q8N7R7 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
CCNYL1Q8N7R7 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CCNYL1Q8N7R7 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
CCNYL1Q8N7R7 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CCNYL1Q8N7R7 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCNYL1Q8N7R7 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCNYL1Q8N7R7 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.71■□□□□ 0.1
CCNYL1Q8N7R7 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
CCNYL1Q8N7R7 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCNYL1Q8N7R7 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.71■□□□□ 0.1
CCNYL1Q8N7R7 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.1
CCNYL1Q8N7R7 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
CCNYL1Q8N7R7 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCNYL1Q8N7R7 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.71■□□□□ 0.1
CCNYL1Q8N7R7 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
CCNYL1Q8N7R7 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCNYL1Q8N7R7 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CCNYL1Q8N7R7 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.7■□□□□ 0.1
CCNYL1Q8N7R7 REM2-202ENST00000536884 1331 ntTSL 2 BASIC15.7■□□□□ 0.1
CCNYL1Q8N7R7 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.7■□□□□ 0.1
CCNYL1Q8N7R7 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCNYL1Q8N7R7 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCNYL1Q8N7R7 AC009090.5-201ENST00000624886 2285 ntBASIC15.7■□□□□ 0.1
CCNYL1Q8N7R7 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCNYL1Q8N7R7 AC104109.2-201ENST00000602919 1418 ntBASIC15.7■□□□□ 0.1
CCNYL1Q8N7R7 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.7■□□□□ 0.1
CCNYL1Q8N7R7 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCNYL1Q8N7R7 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
CCNYL1Q8N7R7 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
CCNYL1Q8N7R7 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CCNYL1Q8N7R7 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.7■□□□□ 0.1
CCNYL1Q8N7R7 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.7■□□□□ 0.1
CCNYL1Q8N7R7 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCNYL1Q8N7R7 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC15.7■□□□□ 0.1
CCNYL1Q8N7R7 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCNYL1Q8N7R7 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.7■□□□□ 0.1
CCNYL1Q8N7R7 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCNYL1Q8N7R7 KRT18P2-201ENST00000447938 1258 ntBASIC15.7■□□□□ 0.1
CCNYL1Q8N7R7 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.7■□□□□ 0.1
CCNYL1Q8N7R7 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.7■□□□□ 0.1
CCNYL1Q8N7R7 AL138918.1-201ENST00000568306 659 ntBASIC15.7■□□□□ 0.1
CCNYL1Q8N7R7 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC15.7■□□□□ 0.1
CCNYL1Q8N7R7 AC068137.2-201ENST00000605408 478 ntBASIC15.7■□□□□ 0.1
CCNYL1Q8N7R7 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.7■□□□□ 0.1
CCNYL1Q8N7R7 C18orf15-201ENST00000623680 2534 ntBASIC15.7■□□□□ 0.1
CCNYL1Q8N7R7 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCNYL1Q8N7R7 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCNYL1Q8N7R7 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CCNYL1Q8N7R7 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCNYL1Q8N7R7 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.7■□□□□ 0.1
CCNYL1Q8N7R7 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCNYL1Q8N7R7 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCNYL1Q8N7R7 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCNYL1Q8N7R7 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCNYL1Q8N7R7 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CCNYL1Q8N7R7 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC15.7■□□□□ 0.1
CCNYL1Q8N7R7 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CCNYL1Q8N7R7 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.69■□□□□ 0.1
CCNYL1Q8N7R7 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCNYL1Q8N7R7 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CCNYL1Q8N7R7 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CCNYL1Q8N7R7 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CCNYL1Q8N7R7 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCNYL1Q8N7R7 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCNYL1Q8N7R7 AC091951.1-201ENST00000512854 2465 ntBASIC15.69■□□□□ 0.1
CCNYL1Q8N7R7 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCNYL1Q8N7R7 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCNYL1Q8N7R7 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.69■□□□□ 0.1
CCNYL1Q8N7R7 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCNYL1Q8N7R7 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.69■□□□□ 0.1
CCNYL1Q8N7R7 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CCNYL1Q8N7R7 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCNYL1Q8N7R7 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.69■□□□□ 0.1
CCNYL1Q8N7R7 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCNYL1Q8N7R7 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CCNYL1Q8N7R7 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC15.69■□□□□ 0.1
CCNYL1Q8N7R7 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC15.69■□□□□ 0.1
CCNYL1Q8N7R7 AL662844.1-201ENST00000546340 181 ntBASIC15.69■□□□□ 0.1
CCNYL1Q8N7R7 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CCNYL1Q8N7R7 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC15.69■□□□□ 0.1
CCNYL1Q8N7R7 AC243562.2-201ENST00000561247 970 ntBASIC15.69■□□□□ 0.1
CCNYL1Q8N7R7 PAM16-215ENST00000577031 548 ntTSL 4 BASIC15.69■□□□□ 0.1
CCNYL1Q8N7R7 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.69■□□□□ 0.1
CCNYL1Q8N7R7 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC15.69■□□□□ 0.1
CCNYL1Q8N7R7 SLC25A6P4-201ENST00000586535 553 ntBASIC15.69■□□□□ 0.1
CCNYL1Q8N7R7 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CCNYL1Q8N7R7 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.69■□□□□ 0.1
CCNYL1Q8N7R7 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms