Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TTC9CQ8N5M4 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TTC9CQ8N5M4 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC12.56□□□□□ -0.4
TTC9CQ8N5M4 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TTC9CQ8N5M4 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TTC9CQ8N5M4 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TTC9CQ8N5M4 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TTC9CQ8N5M4 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TTC9CQ8N5M4 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TTC9CQ8N5M4 RBM39-205ENST00000397370 612 ntTSL 2 BASIC12.56□□□□□ -0.4
TTC9CQ8N5M4 RAC2-202ENST00000401529 569 ntTSL 4 BASIC12.56□□□□□ -0.4
TTC9CQ8N5M4 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC12.56□□□□□ -0.4
TTC9CQ8N5M4 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
TTC9CQ8N5M4 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC12.56□□□□□ -0.4
TTC9CQ8N5M4 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC12.56□□□□□ -0.4
TTC9CQ8N5M4 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC12.56□□□□□ -0.4
TTC9CQ8N5M4 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC12.56□□□□□ -0.4
TTC9CQ8N5M4 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC12.56□□□□□ -0.4
TTC9CQ8N5M4 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC12.56□□□□□ -0.4
TTC9CQ8N5M4 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC12.56□□□□□ -0.4
TTC9CQ8N5M4 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC12.56□□□□□ -0.4
TTC9CQ8N5M4 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TTC9CQ8N5M4 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
TTC9CQ8N5M4 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TTC9CQ8N5M4 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TTC9CQ8N5M4 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TTC9CQ8N5M4 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC12.56□□□□□ -0.4
TTC9CQ8N5M4 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
TTC9CQ8N5M4 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC12.56□□□□□ -0.4
TTC9CQ8N5M4 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC12.56□□□□□ -0.4
TTC9CQ8N5M4 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC12.56□□□□□ -0.4
TTC9CQ8N5M4 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
TTC9CQ8N5M4 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
TTC9CQ8N5M4 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TTC9CQ8N5M4 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC12.56□□□□□ -0.4
TTC9CQ8N5M4 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TTC9CQ8N5M4 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC12.56□□□□□ -0.4
TTC9CQ8N5M4 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC12.56□□□□□ -0.4
TTC9CQ8N5M4 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
TTC9CQ8N5M4 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TTC9CQ8N5M4 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TTC9CQ8N5M4 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
TTC9CQ8N5M4 GOLGA6L17P-202ENST00000614358 1398 ntBASIC12.56□□□□□ -0.4
TTC9CQ8N5M4 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 AC023824.1-201ENST00000562945 2975 ntBASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 RPS19-201ENST00000221975 500 ntTSL 3 BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 SPDYE17-201ENST00000412399 783 ntBASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 FXR1-221ENST00000491674 365 ntTSL 2 BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 SUOX-214ENST00000551841 906 ntTSL 3 BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 BANF1P1-201ENST00000553684 263 ntBASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 RN7SL828P-201ENST00000607615 303 ntBASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TTC9CQ8N5M4 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms