Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.75□□□□□ -0.05
BEST3Q8N1M1 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
BEST3Q8N1M1 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
BEST3Q8N1M1 AC074044.1-201ENST00000609673 707 ntBASIC14.75□□□□□ -0.05
BEST3Q8N1M1 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC14.75□□□□□ -0.05
BEST3Q8N1M1 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
BEST3Q8N1M1 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
BEST3Q8N1M1 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
BEST3Q8N1M1 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
BEST3Q8N1M1 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
BEST3Q8N1M1 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
BEST3Q8N1M1 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
BEST3Q8N1M1 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
BEST3Q8N1M1 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
BEST3Q8N1M1 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.75□□□□□ -0.05
BEST3Q8N1M1 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
BEST3Q8N1M1 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
BEST3Q8N1M1 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.75□□□□□ -0.05
BEST3Q8N1M1 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC14.75□□□□□ -0.05
BEST3Q8N1M1 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.74□□□□□ -0.05
BEST3Q8N1M1 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.74□□□□□ -0.05
BEST3Q8N1M1 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
BEST3Q8N1M1 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
BEST3Q8N1M1 AL391825.1-201ENST00000457671 1364 ntBASIC14.74□□□□□ -0.05
BEST3Q8N1M1 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
BEST3Q8N1M1 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
BEST3Q8N1M1 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
BEST3Q8N1M1 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
BEST3Q8N1M1 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
BEST3Q8N1M1 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.74□□□□□ -0.05
BEST3Q8N1M1 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.74□□□□□ -0.05
BEST3Q8N1M1 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.74□□□□□ -0.05
BEST3Q8N1M1 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.74□□□□□ -0.05
BEST3Q8N1M1 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
BEST3Q8N1M1 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
BEST3Q8N1M1 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.74□□□□□ -0.05
BEST3Q8N1M1 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
BEST3Q8N1M1 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
BEST3Q8N1M1 COX5BP8-201ENST00000416911 349 ntBASIC14.74□□□□□ -0.05
BEST3Q8N1M1 NME2P1-201ENST00000426182 414 ntBASIC14.74□□□□□ -0.05
BEST3Q8N1M1 AL589987.1-201ENST00000453380 819 ntBASIC14.74□□□□□ -0.05
BEST3Q8N1M1 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.74□□□□□ -0.05
BEST3Q8N1M1 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.74□□□□□ -0.05
BEST3Q8N1M1 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
BEST3Q8N1M1 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.74□□□□□ -0.05
BEST3Q8N1M1 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC14.74□□□□□ -0.05
BEST3Q8N1M1 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.74□□□□□ -0.05
BEST3Q8N1M1 AC025048.3-201ENST00000590609 569 ntBASIC14.74□□□□□ -0.05
BEST3Q8N1M1 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.74□□□□□ -0.05
BEST3Q8N1M1 AC005702.4-201ENST00000618393 416 ntBASIC14.74□□□□□ -0.05
BEST3Q8N1M1 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
BEST3Q8N1M1 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
BEST3Q8N1M1 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.74□□□□□ -0.05
BEST3Q8N1M1 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
BEST3Q8N1M1 AL513523.2-202ENST00000427283 2040 ntBASIC14.74□□□□□ -0.05
BEST3Q8N1M1 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
BEST3Q8N1M1 CYP2T1P-202ENST00000641596 2535 ntBASIC14.74□□□□□ -0.05
BEST3Q8N1M1 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.74□□□□□ -0.05
BEST3Q8N1M1 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
BEST3Q8N1M1 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
BEST3Q8N1M1 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
BEST3Q8N1M1 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
BEST3Q8N1M1 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.74□□□□□ -0.05
BEST3Q8N1M1 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
BEST3Q8N1M1 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC14.74□□□□□ -0.05
BEST3Q8N1M1 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
BEST3Q8N1M1 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
BEST3Q8N1M1 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
BEST3Q8N1M1 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
BEST3Q8N1M1 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
BEST3Q8N1M1 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
BEST3Q8N1M1 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.73□□□□□ -0.05
BEST3Q8N1M1 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
BEST3Q8N1M1 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
BEST3Q8N1M1 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.73□□□□□ -0.05
BEST3Q8N1M1 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
BEST3Q8N1M1 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.73□□□□□ -0.05
BEST3Q8N1M1 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
BEST3Q8N1M1 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC14.73□□□□□ -0.05
BEST3Q8N1M1 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
BEST3Q8N1M1 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
BEST3Q8N1M1 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
BEST3Q8N1M1 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
BEST3Q8N1M1 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.73□□□□□ -0.05
BEST3Q8N1M1 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.73□□□□□ -0.05
BEST3Q8N1M1 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.73□□□□□ -0.05
BEST3Q8N1M1 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.73□□□□□ -0.05
BEST3Q8N1M1 AC055876.2-201ENST00000531834 546 ntBASIC14.73□□□□□ -0.05
BEST3Q8N1M1 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.73□□□□□ -0.05
BEST3Q8N1M1 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.73□□□□□ -0.05
BEST3Q8N1M1 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
BEST3Q8N1M1 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC14.73□□□□□ -0.05
BEST3Q8N1M1 CHCHD2P3-201ENST00000603038 451 ntBASIC14.73□□□□□ -0.05
BEST3Q8N1M1 AC008494.3-201ENST00000606615 944 ntBASIC14.73□□□□□ -0.05
BEST3Q8N1M1 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC14.73□□□□□ -0.05
BEST3Q8N1M1 AC007431.3-201ENST00000623221 587 ntBASIC14.73□□□□□ -0.05
BEST3Q8N1M1 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
BEST3Q8N1M1 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.73□□□□□ -0.05
BEST3Q8N1M1 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC14.73□□□□□ -0.05
BEST3Q8N1M1 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms