Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
COL27A1Q8IZC6 SPCS2P2-201ENST00000603270 608 ntBASIC14.55□□□□□ -0.08
COL27A1Q8IZC6 AC007663.3-201ENST00000609632 465 ntBASIC14.55□□□□□ -0.08
COL27A1Q8IZC6 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC14.55□□□□□ -0.08
COL27A1Q8IZC6 AC244157.2-201ENST00000616239 1006 ntBASIC14.55□□□□□ -0.08
COL27A1Q8IZC6 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
COL27A1Q8IZC6 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
COL27A1Q8IZC6 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
COL27A1Q8IZC6 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
COL27A1Q8IZC6 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
COL27A1Q8IZC6 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC14.54□□□□□ -0.08
COL27A1Q8IZC6 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.54□□□□□ -0.08
COL27A1Q8IZC6 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
COL27A1Q8IZC6 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
COL27A1Q8IZC6 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
COL27A1Q8IZC6 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
COL27A1Q8IZC6 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
COL27A1Q8IZC6 AC106820.2-201ENST00000563775 3264 ntBASIC14.54□□□□□ -0.08
COL27A1Q8IZC6 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
COL27A1Q8IZC6 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
COL27A1Q8IZC6 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
COL27A1Q8IZC6 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
COL27A1Q8IZC6 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
COL27A1Q8IZC6 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
COL27A1Q8IZC6 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.54□□□□□ -0.08
COL27A1Q8IZC6 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
COL27A1Q8IZC6 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
COL27A1Q8IZC6 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.54□□□□□ -0.08
COL27A1Q8IZC6 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
COL27A1Q8IZC6 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.54□□□□□ -0.08
COL27A1Q8IZC6 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC14.54□□□□□ -0.08
COL27A1Q8IZC6 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC14.54□□□□□ -0.08
COL27A1Q8IZC6 FTLP10-202ENST00000505798 471 ntBASIC14.54□□□□□ -0.08
COL27A1Q8IZC6 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
COL27A1Q8IZC6 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.54□□□□□ -0.08
COL27A1Q8IZC6 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
COL27A1Q8IZC6 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.54□□□□□ -0.08
COL27A1Q8IZC6 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
COL27A1Q8IZC6 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.54□□□□□ -0.08
COL27A1Q8IZC6 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC14.54□□□□□ -0.08
COL27A1Q8IZC6 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.54□□□□□ -0.08
COL27A1Q8IZC6 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
COL27A1Q8IZC6 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
COL27A1Q8IZC6 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
COL27A1Q8IZC6 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
COL27A1Q8IZC6 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC14.54□□□□□ -0.08
COL27A1Q8IZC6 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
COL27A1Q8IZC6 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC14.54□□□□□ -0.08
COL27A1Q8IZC6 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
COL27A1Q8IZC6 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
COL27A1Q8IZC6 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
COL27A1Q8IZC6 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
COL27A1Q8IZC6 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
COL27A1Q8IZC6 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.53□□□□□ -0.08
COL27A1Q8IZC6 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
COL27A1Q8IZC6 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
COL27A1Q8IZC6 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
COL27A1Q8IZC6 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.53□□□□□ -0.08
COL27A1Q8IZC6 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
COL27A1Q8IZC6 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
COL27A1Q8IZC6 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
COL27A1Q8IZC6 HNRNPA1P63-201ENST00000427917 963 ntBASIC14.53□□□□□ -0.08
COL27A1Q8IZC6 PDIA3P2-201ENST00000428073 158 ntBASIC14.53□□□□□ -0.08
COL27A1Q8IZC6 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC14.53□□□□□ -0.08
COL27A1Q8IZC6 AC245884.6-201ENST00000515672 1067 ntBASIC14.53□□□□□ -0.08
COL27A1Q8IZC6 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
COL27A1Q8IZC6 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC14.53□□□□□ -0.08
COL27A1Q8IZC6 AL160314.3-201ENST00000556041 767 ntBASIC14.53□□□□□ -0.08
COL27A1Q8IZC6 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.53□□□□□ -0.08
COL27A1Q8IZC6 AL358472.3-201ENST00000608147 415 ntBASIC14.53□□□□□ -0.08
COL27A1Q8IZC6 AC018635.2-201ENST00000608625 364 ntBASIC14.53□□□□□ -0.08
COL27A1Q8IZC6 AC138466.3-201ENST00000619983 221 ntBASIC14.53□□□□□ -0.08
COL27A1Q8IZC6 AL603764.1-201ENST00000636452 321 ntBASIC14.53□□□□□ -0.08
COL27A1Q8IZC6 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
COL27A1Q8IZC6 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
COL27A1Q8IZC6 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
COL27A1Q8IZC6 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC14.53□□□□□ -0.08
COL27A1Q8IZC6 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
COL27A1Q8IZC6 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.53□□□□□ -0.08
COL27A1Q8IZC6 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
COL27A1Q8IZC6 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.53□□□□□ -0.08
COL27A1Q8IZC6 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
COL27A1Q8IZC6 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
COL27A1Q8IZC6 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
COL27A1Q8IZC6 AC024909.3-201ENST00000611513 2257 ntBASIC14.53□□□□□ -0.08
COL27A1Q8IZC6 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.53□□□□□ -0.08
COL27A1Q8IZC6 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.53□□□□□ -0.08
COL27A1Q8IZC6 AL596087.1-201ENST00000400979 1969 ntBASIC14.53□□□□□ -0.08
COL27A1Q8IZC6 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.53□□□□□ -0.08
COL27A1Q8IZC6 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
COL27A1Q8IZC6 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
COL27A1Q8IZC6 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
COL27A1Q8IZC6 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
COL27A1Q8IZC6 TPM3P8-201ENST00000330554 643 ntBASIC14.52□□□□□ -0.08
COL27A1Q8IZC6 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
COL27A1Q8IZC6 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC14.52□□□□□ -0.08
COL27A1Q8IZC6 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
COL27A1Q8IZC6 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
COL27A1Q8IZC6 MARK2P5-201ENST00000507649 634 ntBASIC14.52□□□□□ -0.08
COL27A1Q8IZC6 MIR4722-201ENST00000578292 60 ntBASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms