Protein–RNA interactions for Protein: Q8IYT3

CCDC170, Coiled-coil domain-containing protein 170, humanhuman

Predictions only

Length 715 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170Q8IYT3 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CCDC170Q8IYT3 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CCDC170Q8IYT3 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.05■□□□□ 0.32
CCDC170Q8IYT3 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC170Q8IYT3 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC17.05■□□□□ 0.32
CCDC170Q8IYT3 AC023908.3-201ENST00000564211 3047 ntBASIC17.05■□□□□ 0.32
CCDC170Q8IYT3 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC170Q8IYT3 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CCDC170Q8IYT3 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC170Q8IYT3 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC170Q8IYT3 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CCDC170Q8IYT3 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC170Q8IYT3 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC170Q8IYT3 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC170Q8IYT3 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC170Q8IYT3 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CCDC170Q8IYT3 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC170Q8IYT3 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC170Q8IYT3 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC170Q8IYT3 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC170Q8IYT3 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC170Q8IYT3 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC170Q8IYT3 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
CCDC170Q8IYT3 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC170Q8IYT3 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC170Q8IYT3 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC170Q8IYT3 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.04■□□□□ 0.32
CCDC170Q8IYT3 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.04■□□□□ 0.32
CCDC170Q8IYT3 PHKG1P2-201ENST00000457537 863 ntBASIC17.04■□□□□ 0.32
CCDC170Q8IYT3 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC170Q8IYT3 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC170Q8IYT3 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.04■□□□□ 0.32
CCDC170Q8IYT3 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.04■□□□□ 0.32
CCDC170Q8IYT3 AP002472.1-201ENST00000577490 586 ntBASIC17.04■□□□□ 0.32
CCDC170Q8IYT3 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC170Q8IYT3 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.04■□□□□ 0.32
CCDC170Q8IYT3 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC17.04■□□□□ 0.32
CCDC170Q8IYT3 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.04■□□□□ 0.32
CCDC170Q8IYT3 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CCDC170Q8IYT3 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC170Q8IYT3 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC170Q8IYT3 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CCDC170Q8IYT3 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC170Q8IYT3 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC170Q8IYT3 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC170Q8IYT3 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC170Q8IYT3 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC170Q8IYT3 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC170Q8IYT3 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC170Q8IYT3 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC170Q8IYT3 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CCDC170Q8IYT3 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC170Q8IYT3 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC170Q8IYT3 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC170Q8IYT3 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC170Q8IYT3 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CCDC170Q8IYT3 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.03■□□□□ 0.32
CCDC170Q8IYT3 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC170Q8IYT3 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC170Q8IYT3 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC170Q8IYT3 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CCDC170Q8IYT3 FGD5P1-202ENST00000614866 2498 ntBASIC17.03■□□□□ 0.32
CCDC170Q8IYT3 AC004870.1-201ENST00000315132 882 ntBASIC17.03■□□□□ 0.32
CCDC170Q8IYT3 EEF1DP4-201ENST00000446006 880 ntBASIC17.03■□□□□ 0.32
CCDC170Q8IYT3 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.03■□□□□ 0.32
CCDC170Q8IYT3 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.03■□□□□ 0.32
CCDC170Q8IYT3 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.03■□□□□ 0.32
CCDC170Q8IYT3 RARRES2P8-201ENST00000566335 367 ntBASIC17.03■□□□□ 0.32
CCDC170Q8IYT3 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC170Q8IYT3 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC170Q8IYT3 AL136982.4-201ENST00000437689 1740 ntBASIC17.03■□□□□ 0.32
CCDC170Q8IYT3 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC17.03■□□□□ 0.32
CCDC170Q8IYT3 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC170Q8IYT3 RER1-203ENST00000378513 3000 ntTSL 3 BASIC17.03■□□□□ 0.32
CCDC170Q8IYT3 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC170Q8IYT3 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC170Q8IYT3 KRT8P37-201ENST00000451609 1420 ntBASIC17.03■□□□□ 0.32
CCDC170Q8IYT3 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC170Q8IYT3 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CCDC170Q8IYT3 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC170Q8IYT3 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC170Q8IYT3 LINC00528-201ENST00000600723 2160 ntBASIC17.02■□□□□ 0.32
CCDC170Q8IYT3 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC170Q8IYT3 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC170Q8IYT3 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
CCDC170Q8IYT3 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC170Q8IYT3 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CCDC170Q8IYT3 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC17.02■□□□□ 0.32
CCDC170Q8IYT3 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC170Q8IYT3 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC170Q8IYT3 AC232323.1-201ENST00000540724 2099 ntBASIC17.02■□□□□ 0.32
CCDC170Q8IYT3 REXO1L5P-201ENST00000622260 2098 ntBASIC17.02■□□□□ 0.32
CCDC170Q8IYT3 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC170Q8IYT3 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC170Q8IYT3 AC074386.1-202ENST00000463561 864 ntBASIC17.02■□□□□ 0.32
CCDC170Q8IYT3 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC170Q8IYT3 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC170Q8IYT3 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.02■□□□□ 0.32
CCDC170Q8IYT3 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC170Q8IYT3 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms