Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC50Q8IVM0 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC50Q8IVM0 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC50Q8IVM0 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC50Q8IVM0 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC50Q8IVM0 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC50Q8IVM0 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC50Q8IVM0 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
CCDC50Q8IVM0 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC50Q8IVM0 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CCDC50Q8IVM0 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC50Q8IVM0 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC50Q8IVM0 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC50Q8IVM0 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC50Q8IVM0 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC50Q8IVM0 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC50Q8IVM0 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC50Q8IVM0 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC16.81■□□□□ 0.28
CCDC50Q8IVM0 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC50Q8IVM0 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.81■□□□□ 0.28
CCDC50Q8IVM0 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCDC50Q8IVM0 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC50Q8IVM0 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC50Q8IVM0 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC50Q8IVM0 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC50Q8IVM0 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC50Q8IVM0 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CCDC50Q8IVM0 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC50Q8IVM0 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC50Q8IVM0 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC50Q8IVM0 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
CCDC50Q8IVM0 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC50Q8IVM0 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC50Q8IVM0 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC50Q8IVM0 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC50Q8IVM0 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.8■□□□□ 0.28
CCDC50Q8IVM0 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.8■□□□□ 0.28
CCDC50Q8IVM0 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC16.8■□□□□ 0.28
CCDC50Q8IVM0 KRT18P3-201ENST00000451602 1288 ntBASIC16.8■□□□□ 0.28
CCDC50Q8IVM0 SLC25A1P1-201ENST00000528351 927 ntBASIC16.8■□□□□ 0.28
CCDC50Q8IVM0 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
CCDC50Q8IVM0 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.8■□□□□ 0.28
CCDC50Q8IVM0 AC140113.2-201ENST00000604370 208 ntBASIC16.8■□□□□ 0.28
CCDC50Q8IVM0 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
CCDC50Q8IVM0 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC50Q8IVM0 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CCDC50Q8IVM0 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC50Q8IVM0 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CCDC50Q8IVM0 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC50Q8IVM0 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC50Q8IVM0 CICP4-201ENST00000447359 2812 ntBASIC16.8■□□□□ 0.28
CCDC50Q8IVM0 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC50Q8IVM0 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC50Q8IVM0 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC50Q8IVM0 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC50Q8IVM0 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.8■□□□□ 0.28
CCDC50Q8IVM0 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC50Q8IVM0 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCDC50Q8IVM0 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC50Q8IVM0 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC50Q8IVM0 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC50Q8IVM0 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC50Q8IVM0 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC50Q8IVM0 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC50Q8IVM0 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC50Q8IVM0 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC50Q8IVM0 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC50Q8IVM0 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC50Q8IVM0 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC50Q8IVM0 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC50Q8IVM0 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CCDC50Q8IVM0 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC50Q8IVM0 GPX1P2-201ENST00000429271 606 ntBASIC16.79■□□□□ 0.28
CCDC50Q8IVM0 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC50Q8IVM0 AL591424.1-201ENST00000442569 1213 ntBASIC16.79■□□□□ 0.28
CCDC50Q8IVM0 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC50Q8IVM0 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC50Q8IVM0 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC50Q8IVM0 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC50Q8IVM0 AC027601.4-201ENST00000611259 610 ntBASIC16.79■□□□□ 0.28
CCDC50Q8IVM0 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC50Q8IVM0 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC50Q8IVM0 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC50Q8IVM0 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC50Q8IVM0 AC020658.6-201ENST00000623564 1870 ntBASIC16.79■□□□□ 0.28
CCDC50Q8IVM0 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC50Q8IVM0 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC50Q8IVM0 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
CCDC50Q8IVM0 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.79■□□□□ 0.28
CCDC50Q8IVM0 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CCDC50Q8IVM0 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.79■□□□□ 0.28
CCDC50Q8IVM0 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.79■□□□□ 0.28
CCDC50Q8IVM0 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC50Q8IVM0 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC50Q8IVM0 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.78■□□□□ 0.28
CCDC50Q8IVM0 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC50Q8IVM0 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CCDC50Q8IVM0 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CCDC50Q8IVM0 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCDC50Q8IVM0 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms