Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
NUDCD3Q8IVD9 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.79■□□□□ 0.12
NUDCD3Q8IVD9 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
NUDCD3Q8IVD9 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NUDCD3Q8IVD9 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NUDCD3Q8IVD9 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NUDCD3Q8IVD9 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NUDCD3Q8IVD9 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
NUDCD3Q8IVD9 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NUDCD3Q8IVD9 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NUDCD3Q8IVD9 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NUDCD3Q8IVD9 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
NUDCD3Q8IVD9 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC15.79■□□□□ 0.12
NUDCD3Q8IVD9 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
NUDCD3Q8IVD9 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
NUDCD3Q8IVD9 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NUDCD3Q8IVD9 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
NUDCD3Q8IVD9 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.79■□□□□ 0.12
NUDCD3Q8IVD9 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.79■□□□□ 0.12
NUDCD3Q8IVD9 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NUDCD3Q8IVD9 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.79■□□□□ 0.12
NUDCD3Q8IVD9 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC15.79■□□□□ 0.12
NUDCD3Q8IVD9 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.79■□□□□ 0.12
NUDCD3Q8IVD9 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.79■□□□□ 0.12
NUDCD3Q8IVD9 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NUDCD3Q8IVD9 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
NUDCD3Q8IVD9 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.79■□□□□ 0.12
NUDCD3Q8IVD9 AC127383.1-201ENST00000444697 1800 ntBASIC15.79■□□□□ 0.12
NUDCD3Q8IVD9 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NUDCD3Q8IVD9 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NUDCD3Q8IVD9 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.79■□□□□ 0.12
NUDCD3Q8IVD9 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NUDCD3Q8IVD9 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
NUDCD3Q8IVD9 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.79■□□□□ 0.12
NUDCD3Q8IVD9 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NUDCD3Q8IVD9 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.79■□□□□ 0.12
NUDCD3Q8IVD9 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
NUDCD3Q8IVD9 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
NUDCD3Q8IVD9 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NUDCD3Q8IVD9 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
NUDCD3Q8IVD9 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
NUDCD3Q8IVD9 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NUDCD3Q8IVD9 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NUDCD3Q8IVD9 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC15.78■□□□□ 0.12
NUDCD3Q8IVD9 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC15.78■□□□□ 0.12
NUDCD3Q8IVD9 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC15.78■□□□□ 0.12
NUDCD3Q8IVD9 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NUDCD3Q8IVD9 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
NUDCD3Q8IVD9 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NUDCD3Q8IVD9 AC005089.1-201ENST00000619486 2241 ntBASIC15.78■□□□□ 0.12
NUDCD3Q8IVD9 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.78■□□□□ 0.12
NUDCD3Q8IVD9 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NUDCD3Q8IVD9 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC15.78■□□□□ 0.12
NUDCD3Q8IVD9 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NUDCD3Q8IVD9 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
NUDCD3Q8IVD9 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
NUDCD3Q8IVD9 METTL26-205ENST00000397666 726 ntTSL 2 BASIC15.78■□□□□ 0.12
NUDCD3Q8IVD9 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
NUDCD3Q8IVD9 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NUDCD3Q8IVD9 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.78■□□□□ 0.12
NUDCD3Q8IVD9 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC15.78■□□□□ 0.12
NUDCD3Q8IVD9 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NUDCD3Q8IVD9 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.78■□□□□ 0.12
NUDCD3Q8IVD9 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
NUDCD3Q8IVD9 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.78■□□□□ 0.12
NUDCD3Q8IVD9 MIR4313-201ENST00000580760 101 ntBASIC15.78■□□□□ 0.12
NUDCD3Q8IVD9 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.78■□□□□ 0.12
NUDCD3Q8IVD9 AC117500.6-201ENST00000624871 588 ntBASIC15.78■□□□□ 0.12
NUDCD3Q8IVD9 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NUDCD3Q8IVD9 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NUDCD3Q8IVD9 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NUDCD3Q8IVD9 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
NUDCD3Q8IVD9 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.78■□□□□ 0.12
NUDCD3Q8IVD9 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.78■□□□□ 0.12
NUDCD3Q8IVD9 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.78■□□□□ 0.12
NUDCD3Q8IVD9 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
NUDCD3Q8IVD9 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NUDCD3Q8IVD9 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.78■□□□□ 0.12
NUDCD3Q8IVD9 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.78■□□□□ 0.12
NUDCD3Q8IVD9 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
NUDCD3Q8IVD9 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
NUDCD3Q8IVD9 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.78■□□□□ 0.12
NUDCD3Q8IVD9 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
NUDCD3Q8IVD9 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
NUDCD3Q8IVD9 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
NUDCD3Q8IVD9 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
NUDCD3Q8IVD9 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
NUDCD3Q8IVD9 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
NUDCD3Q8IVD9 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms