Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM50Q86XT4 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM50Q86XT4 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.61■□□□□ 0.41
TRIM50Q86XT4 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM50Q86XT4 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM50Q86XT4 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
TRIM50Q86XT4 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM50Q86XT4 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM50Q86XT4 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM50Q86XT4 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.61■□□□□ 0.41
TRIM50Q86XT4 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TRIM50Q86XT4 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
TRIM50Q86XT4 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TRIM50Q86XT4 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM50Q86XT4 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
TRIM50Q86XT4 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM50Q86XT4 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM50Q86XT4 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM50Q86XT4 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM50Q86XT4 HIST1H2BPS3-201ENST00000419683 341 ntBASIC17.6■□□□□ 0.41
TRIM50Q86XT4 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.6■□□□□ 0.41
TRIM50Q86XT4 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM50Q86XT4 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.6■□□□□ 0.41
TRIM50Q86XT4 AC119751.2-201ENST00000504529 210 ntBASIC17.6■□□□□ 0.41
TRIM50Q86XT4 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIM50Q86XT4 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC17.6■□□□□ 0.41
TRIM50Q86XT4 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM50Q86XT4 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC17.6■□□□□ 0.41
TRIM50Q86XT4 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM50Q86XT4 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TRIM50Q86XT4 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TRIM50Q86XT4 MIR6805-201ENST00000615055 62 ntBASIC17.6■□□□□ 0.41
TRIM50Q86XT4 ABBA01031660.1-201ENST00000635219 756 ntBASIC17.6■□□□□ 0.41
TRIM50Q86XT4 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM50Q86XT4 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC17.6■□□□□ 0.41
TRIM50Q86XT4 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC17.6■□□□□ 0.41
TRIM50Q86XT4 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC17.6■□□□□ 0.41
TRIM50Q86XT4 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC17.6■□□□□ 0.41
TRIM50Q86XT4 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC17.6■□□□□ 0.41
TRIM50Q86XT4 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
TRIM50Q86XT4 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TRIM50Q86XT4 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM50Q86XT4 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM50Q86XT4 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM50Q86XT4 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM50Q86XT4 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM50Q86XT4 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM50Q86XT4 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM50Q86XT4 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TRIM50Q86XT4 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TRIM50Q86XT4 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.59■□□□□ 0.41
TRIM50Q86XT4 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
TRIM50Q86XT4 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.59■□□□□ 0.41
TRIM50Q86XT4 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM50Q86XT4 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM50Q86XT4 AL391005.1-201ENST00000623953 2435 ntBASIC17.59■□□□□ 0.41
TRIM50Q86XT4 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
TRIM50Q86XT4 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM50Q86XT4 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM50Q86XT4 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM50Q86XT4 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.59■□□□□ 0.41
TRIM50Q86XT4 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM50Q86XT4 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC17.59■□□□□ 0.41
TRIM50Q86XT4 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
TRIM50Q86XT4 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.59■□□□□ 0.41
TRIM50Q86XT4 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM50Q86XT4 KRT8P22-201ENST00000562317 1415 ntBASIC17.59■□□□□ 0.41
TRIM50Q86XT4 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
TRIM50Q86XT4 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.59■□□□□ 0.41
TRIM50Q86XT4 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM50Q86XT4 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM50Q86XT4 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC17.59■□□□□ 0.41
TRIM50Q86XT4 VDAC1P7-201ENST00000462417 847 ntBASIC17.59■□□□□ 0.41
TRIM50Q86XT4 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC17.59■□□□□ 0.41
TRIM50Q86XT4 AC124283.3-201ENST00000570869 594 ntBASIC17.59■□□□□ 0.41
TRIM50Q86XT4 MIR5189-201ENST00000577370 114 ntBASIC17.59■□□□□ 0.41
TRIM50Q86XT4 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.59■□□□□ 0.41
TRIM50Q86XT4 AL049840.4-201ENST00000602422 811 ntBASIC17.59■□□□□ 0.41
TRIM50Q86XT4 AC133539.2-201ENST00000604757 467 ntBASIC17.59■□□□□ 0.41
TRIM50Q86XT4 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC17.59■□□□□ 0.41
TRIM50Q86XT4 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
TRIM50Q86XT4 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM50Q86XT4 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
TRIM50Q86XT4 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM50Q86XT4 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM50Q86XT4 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM50Q86XT4 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM50Q86XT4 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM50Q86XT4 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.59■□□□□ 0.41
TRIM50Q86XT4 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM50Q86XT4 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.59■□□□□ 0.41
TRIM50Q86XT4 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM50Q86XT4 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
TRIM50Q86XT4 INTS4P2-202ENST00000614726 2019 ntBASIC17.59■□□□□ 0.41
TRIM50Q86XT4 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.59■□□□□ 0.41
TRIM50Q86XT4 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.59■□□□□ 0.41
TRIM50Q86XT4 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TRIM50Q86XT4 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC17.58■□□□□ 0.41
TRIM50Q86XT4 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
TRIM50Q86XT4 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC17.58■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms