Protein–RNA interactions for Protein: Q6UX27

VSTM1, V-set and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1Q6UX27 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VSTM1Q6UX27 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.85■□□□□ 0.29
VSTM1Q6UX27 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VSTM1Q6UX27 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.85■□□□□ 0.29
VSTM1Q6UX27 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.85■□□□□ 0.29
VSTM1Q6UX27 DFFBP1-201ENST00000433250 979 ntBASIC16.85■□□□□ 0.29
VSTM1Q6UX27 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.85■□□□□ 0.29
VSTM1Q6UX27 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.85■□□□□ 0.29
VSTM1Q6UX27 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.85■□□□□ 0.29
VSTM1Q6UX27 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.85■□□□□ 0.29
VSTM1Q6UX27 AL662799.1-202ENST00000614205 422 ntBASIC16.85■□□□□ 0.29
VSTM1Q6UX27 AF228730.6-201ENST00000641497 218 ntBASIC16.85■□□□□ 0.29
VSTM1Q6UX27 AC084121.3-201ENST00000641716 218 ntBASIC16.85■□□□□ 0.29
VSTM1Q6UX27 AC105233.6-201ENST00000642093 218 ntBASIC16.85■□□□□ 0.29
VSTM1Q6UX27 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VSTM1Q6UX27 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.85■□□□□ 0.29
VSTM1Q6UX27 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
VSTM1Q6UX27 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VSTM1Q6UX27 AL391825.1-201ENST00000457671 1364 ntBASIC16.85■□□□□ 0.29
VSTM1Q6UX27 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VSTM1Q6UX27 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
VSTM1Q6UX27 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VSTM1Q6UX27 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
VSTM1Q6UX27 LINC02228-204ENST00000642115 2962 ntBASIC16.85■□□□□ 0.29
VSTM1Q6UX27 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VSTM1Q6UX27 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
VSTM1Q6UX27 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VSTM1Q6UX27 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VSTM1Q6UX27 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VSTM1Q6UX27 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
VSTM1Q6UX27 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.85■□□□□ 0.29
VSTM1Q6UX27 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
VSTM1Q6UX27 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
VSTM1Q6UX27 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
VSTM1Q6UX27 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
VSTM1Q6UX27 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.84■□□□□ 0.29
VSTM1Q6UX27 TNRC18P2-201ENST00000417666 2714 ntBASIC16.84■□□□□ 0.29
VSTM1Q6UX27 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VSTM1Q6UX27 AC134407.2-201ENST00000625089 1978 ntBASIC16.84■□□□□ 0.29
VSTM1Q6UX27 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VSTM1Q6UX27 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VSTM1Q6UX27 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
VSTM1Q6UX27 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
VSTM1Q6UX27 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VSTM1Q6UX27 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VSTM1Q6UX27 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
VSTM1Q6UX27 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.84■□□□□ 0.29
VSTM1Q6UX27 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VSTM1Q6UX27 MEP1AP4-201ENST00000423244 1087 ntBASIC16.84■□□□□ 0.29
VSTM1Q6UX27 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
VSTM1Q6UX27 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC16.84■□□□□ 0.29
VSTM1Q6UX27 SPDYE18-201ENST00000510091 1050 ntBASIC16.84■□□□□ 0.29
VSTM1Q6UX27 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.84■□□□□ 0.29
VSTM1Q6UX27 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC16.84■□□□□ 0.29
VSTM1Q6UX27 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.84■□□□□ 0.29
VSTM1Q6UX27 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.84■□□□□ 0.29
VSTM1Q6UX27 AL132655.2-201ENST00000596276 594 ntBASIC16.84■□□□□ 0.29
VSTM1Q6UX27 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VSTM1Q6UX27 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VSTM1Q6UX27 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VSTM1Q6UX27 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VSTM1Q6UX27 AC007541.1-201ENST00000570282 1469 ntBASIC16.84■□□□□ 0.29
VSTM1Q6UX27 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VSTM1Q6UX27 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VSTM1Q6UX27 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VSTM1Q6UX27 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.84■□□□□ 0.29
VSTM1Q6UX27 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.84■□□□□ 0.29
VSTM1Q6UX27 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VSTM1Q6UX27 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VSTM1Q6UX27 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.84■□□□□ 0.29
VSTM1Q6UX27 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
VSTM1Q6UX27 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
VSTM1Q6UX27 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
VSTM1Q6UX27 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
VSTM1Q6UX27 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.29
VSTM1Q6UX27 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
VSTM1Q6UX27 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
VSTM1Q6UX27 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
VSTM1Q6UX27 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VSTM1Q6UX27 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VSTM1Q6UX27 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.83■□□□□ 0.28
VSTM1Q6UX27 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
VSTM1Q6UX27 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VSTM1Q6UX27 SPDYE19P-201ENST00000338590 713 ntBASIC16.83■□□□□ 0.28
VSTM1Q6UX27 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.83■□□□□ 0.28
VSTM1Q6UX27 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.83■□□□□ 0.28
VSTM1Q6UX27 GNAQP1-201ENST00000444815 1067 ntBASIC16.83■□□□□ 0.28
VSTM1Q6UX27 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.83■□□□□ 0.28
VSTM1Q6UX27 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VSTM1Q6UX27 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
VSTM1Q6UX27 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VSTM1Q6UX27 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.83■□□□□ 0.28
VSTM1Q6UX27 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.83■□□□□ 0.28
VSTM1Q6UX27 TIMM17BP1-201ENST00000545713 516 ntBASIC16.83■□□□□ 0.28
VSTM1Q6UX27 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.83■□□□□ 0.28
VSTM1Q6UX27 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.83■□□□□ 0.28
VSTM1Q6UX27 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
VSTM1Q6UX27 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.83■□□□□ 0.28
VSTM1Q6UX27 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
VSTM1Q6UX27 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms